Gene : Seita.4G163100 S. italica v2.2
Defline:  (1 of 1) PTHR12940 - ES-2 PROTEIN - RELATED Genomic Order:  1631
Name:  ? Seita.4G163100 Secondary Identifier:  ? PAC:32707952
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G163100 0.5kb upstream 0.5kb upstream 6686 true scaffold_4: 25209821-25216506 Setaria italica
Seita.4G163100 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 25216007-25216506 Setaria italica
Seita.4G163100 0.5kb downstream 0.5kb downstream 6686 true scaffold_4: 25209321-25216006 Setaria italica
Seita.4G163100 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 25209321-25209820 Setaria italica
Seita.4G163100 1.0kb upstream 1.0kb upstream 7186 true scaffold_4: 25209821-25217006 Setaria italica
Seita.4G163100 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 25216007-25217006 Setaria italica
Seita.4G163100 1.0kb downstream 1.0kb downstream 7186 true scaffold_4: 25208821-25216006 Setaria italica
Seita.4G163100 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 25208821-25209820 Setaria italica
Seita.4G163100 2.0kb upstream 2.0kb upstream 8186 true scaffold_4: 25209821-25218006 Setaria italica
Seita.4G163100 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 25216007-25218006 Setaria italica
Seita.4G163100 2.0kb downstream 2.0kb downstream 8186 true scaffold_4: 25207821-25216006 Setaria italica
Seita.4G163100 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 25207821-25209820 Setaria italica
Seita.4G163100 5.0kb upstream 5.0kb upstream 11186 true scaffold_4: 25209821-25221006 Setaria italica
Seita.4G163100 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 25216007-25221006 Setaria italica
Seita.4G163100 5.0kb downstream 5.0kb downstream 11186 true scaffold_4: 25204821-25216006 Setaria italica
Seita.4G163100 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 25204821-25209820 Setaria italica
Seita.4G163100 10.0kb upstream 10.0kb upstream 16186 true scaffold_4: 25209821-25226006 Setaria italica
Seita.4G163100 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 25216007-25226006 Setaria italica
Seita.4G163100 10.0kb downstream 10.0kb downstream 16186 true scaffold_4: 25199821-25216006 Setaria italica
Seita.4G163100 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 25199821-25209820 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178384 5267 Panicoideae View MSA
124569668 5269 Grass View MSA
122046377 5273 Angiosperm View MSA
121346564 5274 Embryophyte View MSA
123426374 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.299        
cufflinks 1.56        
cufflinks 1.591        
cufflinks 1.177        
cufflinks 0.83       Low
cufflinks 1.721        
cufflinks 1.031        
cufflinks 1.243        
cufflinks 0.651       Low
cufflinks 2.002       High
cufflinks 1.338        
cufflinks 1.637        
cufflinks 0.924       Low
cufflinks 1.641        
cufflinks 1.256        
cufflinks 1.08        
cufflinks 1.768       High
cufflinks 1.661        
cufflinks 1.535        
cufflinks 1.294        

0 Strain