Gene : Seita.4G108600 S. italica v2.2
Defline:  (1 of 2) PTHR11566//PTHR11566:SF61 - DYNAMIN Genomic Order:  1086
Name:  ? Seita.4G108600 Secondary Identifier:  ? PAC:32707833
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G108600 0.5kb upstream 0.5kb upstream 9215 true scaffold_4: 10080963-10090177 Setaria italica
Seita.4G108600 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 10080963-10081462 Setaria italica
Seita.4G108600 0.5kb downstream 0.5kb downstream 9215 true scaffold_4: 10081463-10090677 Setaria italica
Seita.4G108600 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 10090178-10090677 Setaria italica
Seita.4G108600 1.0kb upstream 1.0kb upstream 9715 true scaffold_4: 10080463-10090177 Setaria italica
Seita.4G108600 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 10080463-10081462 Setaria italica
Seita.4G108600 1.0kb downstream 1.0kb downstream 9715 true scaffold_4: 10081463-10091177 Setaria italica
Seita.4G108600 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 10090178-10091177 Setaria italica
Seita.4G108600 2.0kb upstream 2.0kb upstream 10715 true scaffold_4: 10079463-10090177 Setaria italica
Seita.4G108600 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 10079463-10081462 Setaria italica
Seita.4G108600 2.0kb downstream 2.0kb downstream 10715 true scaffold_4: 10081463-10092177 Setaria italica
Seita.4G108600 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 10090178-10092177 Setaria italica
Seita.4G108600 5.0kb upstream 5.0kb upstream 13715 true scaffold_4: 10076463-10090177 Setaria italica
Seita.4G108600 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 10076463-10081462 Setaria italica
Seita.4G108600 5.0kb downstream 5.0kb downstream 13715 true scaffold_4: 10081463-10095177 Setaria italica
Seita.4G108600 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 10090178-10095177 Setaria italica
Seita.4G108600 10.0kb upstream 10.0kb upstream 18715 true scaffold_4: 10071463-10090177 Setaria italica
Seita.4G108600 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 10071463-10081462 Setaria italica
Seita.4G108600 10.0kb downstream 10.0kb downstream 18715 true scaffold_4: 10081463-10100177 Setaria italica
Seita.4G108600 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 10090178-10100177 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188633 5267 Panicoideae View MSA
124576204 5269 Grass View MSA
122046825 5273 Angiosperm View MSA
123428904 5275 Viridiplantae View MSA
121349714 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.06     High  
cufflinks 20.763     High  
cufflinks 23.847     High  
cufflinks 25.611     High  
cufflinks 19.642     High  
cufflinks 20.56     High  
cufflinks 19.921     High  
cufflinks 14.622     High Low
cufflinks 15.803     High  
cufflinks 15.214       Low
cufflinks 24.987     High  
cufflinks 27.788     High  
cufflinks 17.935     High  
cufflinks 19.018     High  
cufflinks 21.561     High  
cufflinks 29.875     High  
cufflinks 17.077     High  
cufflinks 77.1     High High
cufflinks 19.533     High  
cufflinks 17.171     High  

0 Strain