Gene : Seita.4G134500 S. italica v2.2
Defline:  (1 of 3) PF05093 - Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis (CIAPIN1) Genomic Order:  1345
Name:  ? Seita.4G134500 Secondary Identifier:  ? PAC:32707345
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G134500 0.5kb upstream 0.5kb upstream 1135 true scaffold_4: 14725435-14726569 Setaria italica
Seita.4G134500 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 14726070-14726569 Setaria italica
Seita.4G134500 0.5kb downstream 0.5kb downstream 1135 true scaffold_4: 14724935-14726069 Setaria italica
Seita.4G134500 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 14724935-14725434 Setaria italica
Seita.4G134500 1.0kb upstream 1.0kb upstream 1635 true scaffold_4: 14725435-14727069 Setaria italica
Seita.4G134500 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 14726070-14727069 Setaria italica
Seita.4G134500 1.0kb downstream 1.0kb downstream 1635 true scaffold_4: 14724435-14726069 Setaria italica
Seita.4G134500 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 14724435-14725434 Setaria italica
Seita.4G134500 2.0kb upstream 2.0kb upstream 2635 true scaffold_4: 14725435-14728069 Setaria italica
Seita.4G134500 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 14726070-14728069 Setaria italica
Seita.4G134500 2.0kb downstream 2.0kb downstream 2635 true scaffold_4: 14723435-14726069 Setaria italica
Seita.4G134500 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 14723435-14725434 Setaria italica
Seita.4G134500 5.0kb upstream 5.0kb upstream 5635 true scaffold_4: 14725435-14731069 Setaria italica
Seita.4G134500 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 14726070-14731069 Setaria italica
Seita.4G134500 5.0kb downstream 5.0kb downstream 5635 true scaffold_4: 14720435-14726069 Setaria italica
Seita.4G134500 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 14720435-14725434 Setaria italica
Seita.4G134500 10.0kb upstream 10.0kb upstream 10635 true scaffold_4: 14725435-14736069 Setaria italica
Seita.4G134500 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 14726070-14736069 Setaria italica
Seita.4G134500 10.0kb downstream 10.0kb downstream 10635 true scaffold_4: 14715435-14726069 Setaria italica
Seita.4G134500 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 14715435-14725434 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027685 5273 Angiosperm View MSA
122065021 5267 Panicoideae View MSA
124364336 5269 Grass View MSA
121297306 5274 Embryophyte View MSA
123426846 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 79.96     High High
cufflinks 62.688     High  
cufflinks 35.1     High  
cufflinks 19.799     High Low
cufflinks 24.694     High Low
cufflinks 82.759     High High
cufflinks 38.662     High  
cufflinks 64.024     High  
cufflinks 52.249     High  
cufflinks 61.984     High  
cufflinks 64.407     High  
cufflinks 47.002     High  
cufflinks 20.014     High Low
cufflinks 37.422     High  
cufflinks 42.036     High  
cufflinks 53.047     High  
cufflinks 62.233     High  
cufflinks 76.915     High High
cufflinks 20.745     High Low
cufflinks 40.377     High  

0 Strain