Gene : Seita.4G228000 S. italica v2.2
Defline:  (1 of 1) PF01152 - Bacterial-like globin (Bac_globin) Genomic Order:  2280
Name:  ? Seita.4G228000 Secondary Identifier:  ? PAC:32707134
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G228000 0.5kb upstream 0.5kb upstream 2644 true scaffold_4: 34890263-34892906 Setaria italica
Seita.4G228000 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 34890263-34890762 Setaria italica
Seita.4G228000 0.5kb downstream 0.5kb downstream 2644 true scaffold_4: 34890763-34893406 Setaria italica
Seita.4G228000 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 34892907-34893406 Setaria italica
Seita.4G228000 1.0kb upstream 1.0kb upstream 3144 true scaffold_4: 34889763-34892906 Setaria italica
Seita.4G228000 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 34889763-34890762 Setaria italica
Seita.4G228000 1.0kb downstream 1.0kb downstream 3144 true scaffold_4: 34890763-34893906 Setaria italica
Seita.4G228000 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 34892907-34893906 Setaria italica
Seita.4G228000 2.0kb upstream 2.0kb upstream 4144 true scaffold_4: 34888763-34892906 Setaria italica
Seita.4G228000 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 34888763-34890762 Setaria italica
Seita.4G228000 2.0kb downstream 2.0kb downstream 4144 true scaffold_4: 34890763-34894906 Setaria italica
Seita.4G228000 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 34892907-34894906 Setaria italica
Seita.4G228000 5.0kb upstream 5.0kb upstream 7144 true scaffold_4: 34885763-34892906 Setaria italica
Seita.4G228000 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 34885763-34890762 Setaria italica
Seita.4G228000 5.0kb downstream 5.0kb downstream 7144 true scaffold_4: 34890763-34897906 Setaria italica
Seita.4G228000 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 34892907-34897906 Setaria italica
Seita.4G228000 10.0kb upstream 10.0kb upstream 12144 true scaffold_4: 34880763-34892906 Setaria italica
Seita.4G228000 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 34880763-34890762 Setaria italica
Seita.4G228000 10.0kb downstream 10.0kb downstream 12144 true scaffold_4: 34890763-34902906 Setaria italica
Seita.4G228000 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 34892907-34902906 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177419 5267 Panicoideae View MSA
124574781 5269 Grass View MSA
122044735 5273 Angiosperm View MSA
121349924 5274 Embryophyte View MSA
123381504 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.239        
cufflinks 6.687        
cufflinks 6.759        
cufflinks 9.268        
cufflinks 10.73     High  
cufflinks 7.855        
cufflinks 7.417        
cufflinks 12.135        
cufflinks 9.137        
cufflinks 14.24        
cufflinks 5.201       Low
cufflinks 13.366        
cufflinks 10.298        
cufflinks 18.856     High High
cufflinks 13.306        
cufflinks 3.804       Low
cufflinks 16.77     High High
cufflinks 5.717       Low
cufflinks 12.868     High  
cufflinks 13.096        

0 Strain