Gene : Seita.4G237000 S. italica v2.2
Defline:  (1 of 1) KOG4452 - Predicted membrane protein Genomic Order:  2370
Name:  ? Seita.4G237000 Secondary Identifier:  ? PAC:32707301
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G237000 0.5kb upstream 0.5kb upstream 4146 true scaffold_4: 36088417-36092562 Setaria italica
Seita.4G237000 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 36092063-36092562 Setaria italica
Seita.4G237000 0.5kb downstream 0.5kb downstream 4146 true scaffold_4: 36087917-36092062 Setaria italica
Seita.4G237000 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 36087917-36088416 Setaria italica
Seita.4G237000 1.0kb upstream 1.0kb upstream 4646 true scaffold_4: 36088417-36093062 Setaria italica
Seita.4G237000 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 36092063-36093062 Setaria italica
Seita.4G237000 1.0kb downstream 1.0kb downstream 4646 true scaffold_4: 36087417-36092062 Setaria italica
Seita.4G237000 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 36087417-36088416 Setaria italica
Seita.4G237000 2.0kb upstream 2.0kb upstream 5646 true scaffold_4: 36088417-36094062 Setaria italica
Seita.4G237000 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 36092063-36094062 Setaria italica
Seita.4G237000 2.0kb downstream 2.0kb downstream 5646 true scaffold_4: 36086417-36092062 Setaria italica
Seita.4G237000 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 36086417-36088416 Setaria italica
Seita.4G237000 5.0kb upstream 5.0kb upstream 8646 true scaffold_4: 36088417-36097062 Setaria italica
Seita.4G237000 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 36092063-36097062 Setaria italica
Seita.4G237000 5.0kb downstream 5.0kb downstream 8646 true scaffold_4: 36083417-36092062 Setaria italica
Seita.4G237000 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 36083417-36088416 Setaria italica
Seita.4G237000 10.0kb upstream 10.0kb upstream 13646 true scaffold_4: 36088417-36102062 Setaria italica
Seita.4G237000 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 36092063-36102062 Setaria italica
Seita.4G237000 10.0kb downstream 10.0kb downstream 13646 true scaffold_4: 36078417-36092062 Setaria italica
Seita.4G237000 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 36078417-36088416 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177634 5267 Panicoideae View MSA
124581962 5269 Grass View MSA
122042429 5273 Angiosperm View MSA
121343951 5274 Embryophyte View MSA
123425665 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.36        
cufflinks 15.509     High High
cufflinks 3.901        
cufflinks 3.665       Low
cufflinks 3.168       Low
cufflinks 14.993     High High
cufflinks 7.13        
cufflinks 13.577     High  
cufflinks 8.044        
cufflinks 21.325     High High
cufflinks 8.116        
cufflinks 7.628        
cufflinks 8.817        
cufflinks 8.884        
cufflinks 10.208        
cufflinks 2.938       Low
cufflinks 12.955        
cufflinks 1.793       Low
cufflinks 4.551        
cufflinks 12.58        

0 Strain