Gene : Seita.4G186600 S. italica v2.2
Genomic Order:  1866 Name:  ? Seita.4G186600
Secondary Identifier:  ? PAC:32709511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G186600 0.5kb upstream 0.5kb upstream 1222 true scaffold_4: 30426117-30427338 Setaria italica
Seita.4G186600 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 30426117-30426616 Setaria italica
Seita.4G186600 0.5kb downstream 0.5kb downstream 1222 true scaffold_4: 30426617-30427838 Setaria italica
Seita.4G186600 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 30427339-30427838 Setaria italica
Seita.4G186600 1.0kb upstream 1.0kb upstream 1722 true scaffold_4: 30425617-30427338 Setaria italica
Seita.4G186600 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 30425617-30426616 Setaria italica
Seita.4G186600 1.0kb downstream 1.0kb downstream 1722 true scaffold_4: 30426617-30428338 Setaria italica
Seita.4G186600 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 30427339-30428338 Setaria italica
Seita.4G186600 2.0kb upstream 2.0kb upstream 2722 true scaffold_4: 30424617-30427338 Setaria italica
Seita.4G186600 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 30424617-30426616 Setaria italica
Seita.4G186600 2.0kb downstream 2.0kb downstream 2722 true scaffold_4: 30426617-30429338 Setaria italica
Seita.4G186600 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 30427339-30429338 Setaria italica
Seita.4G186600 5.0kb upstream 5.0kb upstream 5722 true scaffold_4: 30421617-30427338 Setaria italica
Seita.4G186600 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 30421617-30426616 Setaria italica
Seita.4G186600 5.0kb downstream 5.0kb downstream 5722 true scaffold_4: 30426617-30432338 Setaria italica
Seita.4G186600 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 30427339-30432338 Setaria italica
Seita.4G186600 10.0kb upstream 10.0kb upstream 10722 true scaffold_4: 30416617-30427338 Setaria italica
Seita.4G186600 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 30416617-30426616 Setaria italica
Seita.4G186600 10.0kb downstream 10.0kb downstream 10722 true scaffold_4: 30426617-30437338 Setaria italica
Seita.4G186600 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 30427339-30437338 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027926 5273 Angiosperm View MSA
122194515 5267 Panicoideae View MSA
124589263 5269 Grass View MSA
121297498 5274 Embryophyte View MSA
123335549 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.301     Low High
cufflinks 0.019     Low Low
cufflinks 0.043     Low  
cufflinks 0.047     Low  
cufflinks 0.042     Low  
cufflinks 0.054     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.142       High

0 Strain