Gene : Seita.4G210400 S. italica v2.2
Defline:  (1 of 1) PTHR11851:SF152 - PROTEIN UCR-2.3 Genomic Order:  2104
Name:  ? Seita.4G210400 Secondary Identifier:  ? PAC:32707455
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G210400 0.5kb upstream 0.5kb upstream 11106 true scaffold_4: 32785550-32796655 Setaria italica
Seita.4G210400 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 32785550-32786049 Setaria italica
Seita.4G210400 0.5kb downstream 0.5kb downstream 11106 true scaffold_4: 32786050-32797155 Setaria italica
Seita.4G210400 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 32796656-32797155 Setaria italica
Seita.4G210400 1.0kb upstream 1.0kb upstream 11606 true scaffold_4: 32785050-32796655 Setaria italica
Seita.4G210400 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 32785050-32786049 Setaria italica
Seita.4G210400 1.0kb downstream 1.0kb downstream 11606 true scaffold_4: 32786050-32797655 Setaria italica
Seita.4G210400 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 32796656-32797655 Setaria italica
Seita.4G210400 2.0kb upstream 2.0kb upstream 12606 true scaffold_4: 32784050-32796655 Setaria italica
Seita.4G210400 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 32784050-32786049 Setaria italica
Seita.4G210400 2.0kb downstream 2.0kb downstream 12606 true scaffold_4: 32786050-32798655 Setaria italica
Seita.4G210400 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 32796656-32798655 Setaria italica
Seita.4G210400 5.0kb upstream 5.0kb upstream 15606 true scaffold_4: 32781050-32796655 Setaria italica
Seita.4G210400 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 32781050-32786049 Setaria italica
Seita.4G210400 5.0kb downstream 5.0kb downstream 15606 true scaffold_4: 32786050-32801655 Setaria italica
Seita.4G210400 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 32796656-32801655 Setaria italica
Seita.4G210400 10.0kb upstream 10.0kb upstream 20606 true scaffold_4: 32776050-32796655 Setaria italica
Seita.4G210400 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 32776050-32786049 Setaria italica
Seita.4G210400 10.0kb downstream 10.0kb downstream 20606 true scaffold_4: 32786050-32806655 Setaria italica
Seita.4G210400 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 32796656-32806655 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190118 5267 Panicoideae View MSA
124578160 5269 Grass View MSA
122044944 5273 Angiosperm View MSA
121346655 5274 Embryophyte View MSA
123428815 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.285     High  
cufflinks 25.566     High  
cufflinks 95.852     High High
cufflinks 70.089     High High
cufflinks 77.431     High High
cufflinks 28.606     High  
cufflinks 41.226     High  
cufflinks 41.977     High  
cufflinks 74.405     High High
cufflinks 9.672       Low
cufflinks 22.181     High  
cufflinks 19.68     High  
cufflinks 21.256     High  
cufflinks 92.391     High High
cufflinks 19.653     High  
cufflinks 41.753     High  
cufflinks 16.727     High Low
cufflinks 34.476     High  
cufflinks 45.453     High  
cufflinks 18.463     High  

0 Strain