Gene : Seita.4G287000 S. italica v2.2
Defline:  (1 of 17) PF05212 - Protein of unknown function (DUF707) (DUF707) Genomic Order:  2870
Name:  ? Seita.4G287000 Secondary Identifier:  ? PAC:32707252
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G287000 0.5kb upstream 0.5kb upstream 2285 true scaffold_4: 39961148-39963432 Setaria italica
Seita.4G287000 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 39961148-39961647 Setaria italica
Seita.4G287000 0.5kb downstream 0.5kb downstream 2285 true scaffold_4: 39961648-39963932 Setaria italica
Seita.4G287000 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 39963433-39963932 Setaria italica
Seita.4G287000 1.0kb upstream 1.0kb upstream 2785 true scaffold_4: 39960648-39963432 Setaria italica
Seita.4G287000 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 39960648-39961647 Setaria italica
Seita.4G287000 1.0kb downstream 1.0kb downstream 2785 true scaffold_4: 39961648-39964432 Setaria italica
Seita.4G287000 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 39963433-39964432 Setaria italica
Seita.4G287000 2.0kb upstream 2.0kb upstream 3785 true scaffold_4: 39959648-39963432 Setaria italica
Seita.4G287000 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 39959648-39961647 Setaria italica
Seita.4G287000 2.0kb downstream 2.0kb downstream 3785 true scaffold_4: 39961648-39965432 Setaria italica
Seita.4G287000 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 39963433-39965432 Setaria italica
Seita.4G287000 5.0kb upstream 5.0kb upstream 6785 true scaffold_4: 39956648-39963432 Setaria italica
Seita.4G287000 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 39956648-39961647 Setaria italica
Seita.4G287000 5.0kb downstream 5.0kb downstream 6785 true scaffold_4: 39961648-39968432 Setaria italica
Seita.4G287000 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 39963433-39968432 Setaria italica
Seita.4G287000 10.0kb upstream 10.0kb upstream 11785 true scaffold_4: 39951648-39963432 Setaria italica
Seita.4G287000 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 39951648-39961647 Setaria italica
Seita.4G287000 10.0kb downstream 10.0kb downstream 11785 true scaffold_4: 39961648-39973432 Setaria italica
Seita.4G287000 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 39963433-39973432 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994235 5273 Angiosperm View MSA
122180609 5267 Panicoideae View MSA
124583473 5269 Grass View MSA
121264471 5274 Embryophyte View MSA
123426523 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.102     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.528        
cufflinks 0.035     Low Low
cufflinks 5.757        
cufflinks 1.276        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.139        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.844        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.405        

0 Strain