Gene : Seita.5G123500 S. italica v2.2
Defline:  (1 of 2) PTHR10293:SF16 - GLUTAREDOXIN-RELATED PROTEIN 5, MITOCHONDRIAL Genomic Order:  1235
Name:  ? Seita.5G123500 Secondary Identifier:  ? PAC:32682778
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G123500 0.5kb upstream 0.5kb upstream 3969 true scaffold_5: 10342940-10346908 Setaria italica
Seita.5G123500 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10342940-10343439 Setaria italica
Seita.5G123500 0.5kb downstream 0.5kb downstream 3969 true scaffold_5: 10343440-10347408 Setaria italica
Seita.5G123500 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10346909-10347408 Setaria italica
Seita.5G123500 1.0kb upstream 1.0kb upstream 4469 true scaffold_5: 10342440-10346908 Setaria italica
Seita.5G123500 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10342440-10343439 Setaria italica
Seita.5G123500 1.0kb downstream 1.0kb downstream 4469 true scaffold_5: 10343440-10347908 Setaria italica
Seita.5G123500 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10346909-10347908 Setaria italica
Seita.5G123500 2.0kb upstream 2.0kb upstream 5469 true scaffold_5: 10341440-10346908 Setaria italica
Seita.5G123500 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10341440-10343439 Setaria italica
Seita.5G123500 2.0kb downstream 2.0kb downstream 5469 true scaffold_5: 10343440-10348908 Setaria italica
Seita.5G123500 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10346909-10348908 Setaria italica
Seita.5G123500 5.0kb upstream 5.0kb upstream 8469 true scaffold_5: 10338440-10346908 Setaria italica
Seita.5G123500 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10338440-10343439 Setaria italica
Seita.5G123500 5.0kb downstream 5.0kb downstream 8469 true scaffold_5: 10343440-10351908 Setaria italica
Seita.5G123500 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10346909-10351908 Setaria italica
Seita.5G123500 10.0kb upstream 10.0kb upstream 13469 true scaffold_5: 10333440-10346908 Setaria italica
Seita.5G123500 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10333440-10343439 Setaria italica
Seita.5G123500 10.0kb downstream 10.0kb downstream 13469 true scaffold_5: 10343440-10356908 Setaria italica
Seita.5G123500 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10346909-10356908 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198419 5267 Panicoideae View MSA
124586477 5269 Grass View MSA
122043030 5273 Angiosperm View MSA
121347328 5274 Embryophyte View MSA
123424474 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.723        
cufflinks 5.822        
cufflinks 2.924       Low
cufflinks 2.7       Low
cufflinks 3.16       Low
cufflinks 5.036        
cufflinks 4.437        
cufflinks 6.776       High
cufflinks 6.479       High
cufflinks 6.865       High
cufflinks 4.455        
cufflinks 5.43        
cufflinks 3.589        
cufflinks 4.633        
cufflinks 5.88        
cufflinks 2.882       Low
cufflinks 6.427       High
cufflinks 3.088       Low
cufflinks 3.661        
cufflinks 6.072        

0 Strain