Gene : Seita.5G244300 S. italica v2.2
Defline:  (1 of 1) 3.1.3.76 - Lipid-phosphate phosphatase / Soluble epoxide hydrolase Genomic Order:  2443
Name:  ? Seita.5G244300 Secondary Identifier:  ? PAC:32682379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G244300 0.5kb upstream 0.5kb upstream 4355 true scaffold_5: 30676706-30681060 Setaria italica
Seita.5G244300 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 30676706-30677205 Setaria italica
Seita.5G244300 0.5kb downstream 0.5kb downstream 4355 true scaffold_5: 30677206-30681560 Setaria italica
Seita.5G244300 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 30681061-30681560 Setaria italica
Seita.5G244300 1.0kb upstream 1.0kb upstream 4855 true scaffold_5: 30676206-30681060 Setaria italica
Seita.5G244300 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 30676206-30677205 Setaria italica
Seita.5G244300 1.0kb downstream 1.0kb downstream 4855 true scaffold_5: 30677206-30682060 Setaria italica
Seita.5G244300 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 30681061-30682060 Setaria italica
Seita.5G244300 2.0kb upstream 2.0kb upstream 5855 true scaffold_5: 30675206-30681060 Setaria italica
Seita.5G244300 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 30675206-30677205 Setaria italica
Seita.5G244300 2.0kb downstream 2.0kb downstream 5855 true scaffold_5: 30677206-30683060 Setaria italica
Seita.5G244300 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 30681061-30683060 Setaria italica
Seita.5G244300 5.0kb upstream 5.0kb upstream 8855 true scaffold_5: 30672206-30681060 Setaria italica
Seita.5G244300 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 30672206-30677205 Setaria italica
Seita.5G244300 5.0kb downstream 5.0kb downstream 8855 true scaffold_5: 30677206-30686060 Setaria italica
Seita.5G244300 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 30681061-30686060 Setaria italica
Seita.5G244300 10.0kb upstream 10.0kb upstream 13855 true scaffold_5: 30667206-30681060 Setaria italica
Seita.5G244300 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 30667206-30677205 Setaria italica
Seita.5G244300 10.0kb downstream 10.0kb downstream 13855 true scaffold_5: 30677206-30691060 Setaria italica
Seita.5G244300 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 30681061-30691060 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181578 5267 Panicoideae View MSA
124588540 5269 Grass View MSA
122045199 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121343939 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.775        
cufflinks 5.36        
cufflinks 0.644       Low
cufflinks 0.785       Low
cufflinks 1.39        
cufflinks 5.479        
cufflinks 3.47        
cufflinks 4.159        
cufflinks 4.115        
cufflinks 6.152        
cufflinks 10.216       High
cufflinks 7.085        
cufflinks 6.979        
cufflinks 0.747       Low
cufflinks 9.658       High
cufflinks 1.797        
cufflinks 7.743        
cufflinks 2.243        
cufflinks 1.182       Low
cufflinks 8.209        

0 Strain