Gene : Seita.5G247200 S. italica v2.2
Defline:  (1 of 1) 2.4.1.57 - Phosphatidylinositol alpha-mannosyltransferase / Phosphatidyl-myo-inositol alpha-mannosyltransferase Genomic Order:  2472
Name:  ? Seita.5G247200 Secondary Identifier:  ? PAC:32682019
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G247200 0.5kb upstream 0.5kb upstream 2003 true scaffold_5: 30879796-30881798 Setaria italica
Seita.5G247200 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 30879796-30880295 Setaria italica
Seita.5G247200 0.5kb downstream 0.5kb downstream 2003 true scaffold_5: 30880296-30882298 Setaria italica
Seita.5G247200 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 30881799-30882298 Setaria italica
Seita.5G247200 1.0kb upstream 1.0kb upstream 2503 true scaffold_5: 30879296-30881798 Setaria italica
Seita.5G247200 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 30879296-30880295 Setaria italica
Seita.5G247200 1.0kb downstream 1.0kb downstream 2503 true scaffold_5: 30880296-30882798 Setaria italica
Seita.5G247200 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 30881799-30882798 Setaria italica
Seita.5G247200 2.0kb upstream 2.0kb upstream 3503 true scaffold_5: 30878296-30881798 Setaria italica
Seita.5G247200 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 30878296-30880295 Setaria italica
Seita.5G247200 2.0kb downstream 2.0kb downstream 3503 true scaffold_5: 30880296-30883798 Setaria italica
Seita.5G247200 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 30881799-30883798 Setaria italica
Seita.5G247200 5.0kb upstream 5.0kb upstream 6503 true scaffold_5: 30875296-30881798 Setaria italica
Seita.5G247200 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 30875296-30880295 Setaria italica
Seita.5G247200 5.0kb downstream 5.0kb downstream 6503 true scaffold_5: 30880296-30886798 Setaria italica
Seita.5G247200 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 30881799-30886798 Setaria italica
Seita.5G247200 10.0kb upstream 10.0kb upstream 11503 true scaffold_5: 30870296-30881798 Setaria italica
Seita.5G247200 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 30870296-30880295 Setaria italica
Seita.5G247200 10.0kb downstream 10.0kb downstream 11503 true scaffold_5: 30880296-30891798 Setaria italica
Seita.5G247200 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 30881799-30891798 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177374 5267 Panicoideae View MSA
124570840 5269 Grass View MSA
122049577 5273 Angiosperm View MSA
121345935 5274 Embryophyte View MSA
123380294 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low Low
cufflinks 0.086     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.218        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.749       High
cufflinks 0.015     Low Low
cufflinks 0.74        
cufflinks 0.489        
cufflinks 0.068     Low  
cufflinks 1.471       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.79       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low Low
cufflinks 2.152       High

0 Strain