Gene : Seita.5G218400 S. italica v2.2
Defline:  (1 of 1) PTHR24115:SF372 - KIF19A Genomic Order:  2184
Name:  ? Seita.5G218400 Secondary Identifier:  ? PAC:32682167
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G218400 0.5kb upstream 0.5kb upstream 5209 true scaffold_5: 27797602-27802810 Setaria italica
Seita.5G218400 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 27802311-27802810 Setaria italica
Seita.5G218400 0.5kb downstream 0.5kb downstream 5209 true scaffold_5: 27797102-27802310 Setaria italica
Seita.5G218400 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 27797102-27797601 Setaria italica
Seita.5G218400 1.0kb upstream 1.0kb upstream 5709 true scaffold_5: 27797602-27803310 Setaria italica
Seita.5G218400 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 27802311-27803310 Setaria italica
Seita.5G218400 1.0kb downstream 1.0kb downstream 5709 true scaffold_5: 27796602-27802310 Setaria italica
Seita.5G218400 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 27796602-27797601 Setaria italica
Seita.5G218400 2.0kb upstream 2.0kb upstream 6709 true scaffold_5: 27797602-27804310 Setaria italica
Seita.5G218400 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 27802311-27804310 Setaria italica
Seita.5G218400 2.0kb downstream 2.0kb downstream 6709 true scaffold_5: 27795602-27802310 Setaria italica
Seita.5G218400 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 27795602-27797601 Setaria italica
Seita.5G218400 5.0kb upstream 5.0kb upstream 9709 true scaffold_5: 27797602-27807310 Setaria italica
Seita.5G218400 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 27802311-27807310 Setaria italica
Seita.5G218400 5.0kb downstream 5.0kb downstream 9709 true scaffold_5: 27792602-27802310 Setaria italica
Seita.5G218400 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 27792602-27797601 Setaria italica
Seita.5G218400 10.0kb upstream 10.0kb upstream 14709 true scaffold_5: 27797602-27812310 Setaria italica
Seita.5G218400 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 27802311-27812310 Setaria italica
Seita.5G218400 10.0kb downstream 10.0kb downstream 14709 true scaffold_5: 27787602-27802310 Setaria italica
Seita.5G218400 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 27787602-27797601 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184691 5267 Panicoideae View MSA
124573251 5269 Grass View MSA
122044621 5273 Angiosperm View MSA
123429039 5275 Viridiplantae View MSA
121350608 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.801        
cufflinks 4.642        
cufflinks 0.024     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.419        
cufflinks 3.266        
cufflinks 3.899        
cufflinks 2.436        
cufflinks 1.942        
cufflinks 2.061        
cufflinks 1.713        
cufflinks 0.934        
cufflinks 0.017     Low Low
cufflinks 3.994        
cufflinks 0.187        
cufflinks 2.957        
cufflinks 0.14        
cufflinks 0.024     Low Low
cufflinks 3.38        

0 Strain