Gene : Seita.5G326200 S. italica v2.2
Defline:  (1 of 1) PTHR10460//PTHR10460:SF11 - ABL INTERACTOR Genomic Order:  3262
Name:  ? Seita.5G326200 Secondary Identifier:  ? PAC:32681694
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G326200 0.5kb upstream 0.5kb upstream 3911 true scaffold_5: 37532248-37536158 Setaria italica
Seita.5G326200 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 37535659-37536158 Setaria italica
Seita.5G326200 0.5kb downstream 0.5kb downstream 3911 true scaffold_5: 37531748-37535658 Setaria italica
Seita.5G326200 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 37531748-37532247 Setaria italica
Seita.5G326200 1.0kb upstream 1.0kb upstream 4411 true scaffold_5: 37532248-37536658 Setaria italica
Seita.5G326200 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 37535659-37536658 Setaria italica
Seita.5G326200 1.0kb downstream 1.0kb downstream 4411 true scaffold_5: 37531248-37535658 Setaria italica
Seita.5G326200 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 37531248-37532247 Setaria italica
Seita.5G326200 2.0kb upstream 2.0kb upstream 5411 true scaffold_5: 37532248-37537658 Setaria italica
Seita.5G326200 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 37535659-37537658 Setaria italica
Seita.5G326200 2.0kb downstream 2.0kb downstream 5411 true scaffold_5: 37530248-37535658 Setaria italica
Seita.5G326200 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 37530248-37532247 Setaria italica
Seita.5G326200 5.0kb upstream 5.0kb upstream 8411 true scaffold_5: 37532248-37540658 Setaria italica
Seita.5G326200 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 37535659-37540658 Setaria italica
Seita.5G326200 5.0kb downstream 5.0kb downstream 8411 true scaffold_5: 37527248-37535658 Setaria italica
Seita.5G326200 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 37527248-37532247 Setaria italica
Seita.5G326200 10.0kb upstream 10.0kb upstream 13411 true scaffold_5: 37532248-37545658 Setaria italica
Seita.5G326200 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 37535659-37545658 Setaria italica
Seita.5G326200 10.0kb downstream 10.0kb downstream 13411 true scaffold_5: 37522248-37535658 Setaria italica
Seita.5G326200 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 37522248-37532247 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026739 5273 Angiosperm View MSA
122194595 5267 Panicoideae View MSA
124568288 5269 Grass View MSA
121296518 5274 Embryophyte View MSA
123334666 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.821        
cufflinks 0.715        
cufflinks 0.005     Low Low
cufflinks 0.008     Low Low
cufflinks 0.027     Low Low
cufflinks 0.799        
cufflinks 0.756        
cufflinks 0.498        
cufflinks 0.503        
cufflinks 0.628        
cufflinks 0.544        
cufflinks 0.12     Low  
cufflinks 0.137     Low  
cufflinks 0.034     Low Low
cufflinks 0.347        
cufflinks 0.274        
cufflinks 0.216        
cufflinks 0.289        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.241        

0 Strain