Gene : Seita.5G466600 S. italica v2.2
Defline:  (1 of 1) PTHR24006:SF453 - BTB/POZ DOMAIN-CONTAINING PROTEIN FBL11 Genomic Order:  4666
Name:  ? Seita.5G466600 Secondary Identifier:  ? PAC:32681603
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.5G466600 0.5kb upstream 0.5kb upstream 7340 true scaffold_5: 47032557-47039896 Setaria italica
Seita.5G466600 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 47032557-47033056 Setaria italica
Seita.5G466600 0.5kb downstream 0.5kb downstream 7340 true scaffold_5: 47033057-47040396 Setaria italica
Seita.5G466600 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 47039897-47040396 Setaria italica
Seita.5G466600 1.0kb upstream 1.0kb upstream 7840 true scaffold_5: 47032057-47039896 Setaria italica
Seita.5G466600 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 47032057-47033056 Setaria italica
Seita.5G466600 1.0kb downstream 1.0kb downstream 7840 true scaffold_5: 47033057-47040896 Setaria italica
Seita.5G466600 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 47039897-47040896 Setaria italica
Seita.5G466600 2.0kb upstream 2.0kb upstream 8840 true scaffold_5: 47031057-47039896 Setaria italica
Seita.5G466600 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 47031057-47033056 Setaria italica
Seita.5G466600 2.0kb downstream 2.0kb downstream 8840 true scaffold_5: 47033057-47041896 Setaria italica
Seita.5G466600 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 47039897-47041896 Setaria italica
Seita.5G466600 5.0kb upstream 5.0kb upstream 11840 true scaffold_5: 47028057-47039896 Setaria italica
Seita.5G466600 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 47028057-47033056 Setaria italica
Seita.5G466600 5.0kb downstream 5.0kb downstream 11840 true scaffold_5: 47033057-47044896 Setaria italica
Seita.5G466600 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 47039897-47044896 Setaria italica
Seita.5G466600 10.0kb upstream 10.0kb upstream 16840 true scaffold_5: 47023057-47039896 Setaria italica
Seita.5G466600 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 47023057-47033056 Setaria italica
Seita.5G466600 10.0kb downstream 10.0kb downstream 16840 true scaffold_5: 47033057-47049896 Setaria italica
Seita.5G466600 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 47039897-47049896 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026237 5273 Angiosperm View MSA
122185112 5267 Panicoideae View MSA
124586637 5269 Grass View MSA
121346390 5274 Embryophyte View MSA
123428012 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.133       High
cufflinks 3.169        
cufflinks 3.871        
cufflinks 3.178        
cufflinks 2.08       Low
cufflinks 3.178        
cufflinks 3.001        
cufflinks 2.682        
cufflinks 1.724       Low
cufflinks 1.628       Low
cufflinks 3.145        
cufflinks 3.389        
cufflinks 3.643        
cufflinks 2.405        
cufflinks 3.073        
cufflinks 4.383       High
cufflinks 3.173        
cufflinks 4.754       High
cufflinks 2.518        
cufflinks 3.096        

0 Strain