Gene : Seita.6G115500 S. italica v2.2
Defline:  (1 of 1) PTHR14146 - EXOCYST COMPLEX COMPONENT 4 Genomic Order:  1155
Name:  ? Seita.6G115500 Secondary Identifier:  ? PAC:32701212
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G115500 0.5kb upstream 0.5kb upstream 18626 true scaffold_6: 19065727-19084352 Setaria italica
Seita.6G115500 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19065727-19066226 Setaria italica
Seita.6G115500 0.5kb downstream 0.5kb downstream 18626 true scaffold_6: 19066227-19084852 Setaria italica
Seita.6G115500 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19084353-19084852 Setaria italica
Seita.6G115500 1.0kb upstream 1.0kb upstream 19126 true scaffold_6: 19065227-19084352 Setaria italica
Seita.6G115500 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19065227-19066226 Setaria italica
Seita.6G115500 1.0kb downstream 1.0kb downstream 19126 true scaffold_6: 19066227-19085352 Setaria italica
Seita.6G115500 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19084353-19085352 Setaria italica
Seita.6G115500 2.0kb upstream 2.0kb upstream 20126 true scaffold_6: 19064227-19084352 Setaria italica
Seita.6G115500 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19064227-19066226 Setaria italica
Seita.6G115500 2.0kb downstream 2.0kb downstream 20126 true scaffold_6: 19066227-19086352 Setaria italica
Seita.6G115500 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19084353-19086352 Setaria italica
Seita.6G115500 5.0kb upstream 5.0kb upstream 23126 true scaffold_6: 19061227-19084352 Setaria italica
Seita.6G115500 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19061227-19066226 Setaria italica
Seita.6G115500 5.0kb downstream 5.0kb downstream 23126 true scaffold_6: 19066227-19089352 Setaria italica
Seita.6G115500 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19084353-19089352 Setaria italica
Seita.6G115500 10.0kb upstream 10.0kb upstream 28126 true scaffold_6: 19056227-19084352 Setaria italica
Seita.6G115500 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19056227-19066226 Setaria italica
Seita.6G115500 10.0kb downstream 10.0kb downstream 28126 true scaffold_6: 19066227-19094352 Setaria italica
Seita.6G115500 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19084353-19094352 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184182 5267 Panicoideae View MSA
124579905 5269 Grass View MSA
122042326 5273 Angiosperm View MSA
121345698 5274 Embryophyte View MSA
123380257 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.879        
cufflinks 7.293       High
cufflinks 6.3        
cufflinks 4.563       Low
cufflinks 4.131       Low
cufflinks 6.844        
cufflinks 7.083        
cufflinks 5.124        
cufflinks 4.983       Low
cufflinks 5.065        
cufflinks 7.871       High
cufflinks 5.265        
cufflinks 6.089        
cufflinks 6.238        
cufflinks 7.395       High
cufflinks 7.238       High
cufflinks 5.038        
cufflinks 6.618        
cufflinks 5.518        
cufflinks 6.069        

0 Strain