Gene : Seita.6G049400 S. italica v2.2
Defline:  (1 of 1) PTHR19241:SF213 - ABC TRANSPORTER G FAMILY MEMBER 14 Genomic Order:  494
Name:  ? Seita.6G049400 Secondary Identifier:  ? PAC:32699581
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G049400 0.5kb upstream 0.5kb upstream 4886 true scaffold_6: 3860065-3864950 Setaria italica
Seita.6G049400 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3864451-3864950 Setaria italica
Seita.6G049400 0.5kb downstream 0.5kb downstream 4886 true scaffold_6: 3859565-3864450 Setaria italica
Seita.6G049400 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3859565-3860064 Setaria italica
Seita.6G049400 1.0kb upstream 1.0kb upstream 5386 true scaffold_6: 3860065-3865450 Setaria italica
Seita.6G049400 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3864451-3865450 Setaria italica
Seita.6G049400 1.0kb downstream 1.0kb downstream 5386 true scaffold_6: 3859065-3864450 Setaria italica
Seita.6G049400 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3859065-3860064 Setaria italica
Seita.6G049400 2.0kb upstream 2.0kb upstream 6386 true scaffold_6: 3860065-3866450 Setaria italica
Seita.6G049400 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3864451-3866450 Setaria italica
Seita.6G049400 2.0kb downstream 2.0kb downstream 6386 true scaffold_6: 3858065-3864450 Setaria italica
Seita.6G049400 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3858065-3860064 Setaria italica
Seita.6G049400 5.0kb upstream 5.0kb upstream 9386 true scaffold_6: 3860065-3869450 Setaria italica
Seita.6G049400 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3864451-3869450 Setaria italica
Seita.6G049400 5.0kb downstream 5.0kb downstream 9386 true scaffold_6: 3855065-3864450 Setaria italica
Seita.6G049400 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3855065-3860064 Setaria italica
Seita.6G049400 10.0kb upstream 10.0kb upstream 14386 true scaffold_6: 3860065-3874450 Setaria italica
Seita.6G049400 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3864451-3874450 Setaria italica
Seita.6G049400 10.0kb downstream 10.0kb downstream 14386 true scaffold_6: 3850065-3864450 Setaria italica
Seita.6G049400 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3850065-3860064 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175560 5267 Panicoideae View MSA
124577689 5269 Grass View MSA
122050234 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121348566 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.869        
cufflinks 1.286        
cufflinks 1.963        
cufflinks 0.416       Low
cufflinks 0.838       Low
cufflinks 2.782        
cufflinks 1.002        
cufflinks 3.744        
cufflinks 0.737       Low
cufflinks 12.341       High
cufflinks 5.8        
cufflinks 4.436        
cufflinks 4.542        
cufflinks 5.688        
cufflinks 12.47       High
cufflinks 2.619        
cufflinks 8.819       High
cufflinks 0.648       Low
cufflinks 1.561        
cufflinks 5.978        

0 Strain