Gene : Seita.6G177100 S. italica v2.2
Defline:  (1 of 1) PTHR12708 - DNA POLYMERASE EPSILON SUBUNIT B Genomic Order:  1771
Name:  ? Seita.6G177100 Secondary Identifier:  ? PAC:32699155
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G177100 0.5kb upstream 0.5kb upstream 5689 true scaffold_6: 30095947-30101635 Setaria italica
Seita.6G177100 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 30095947-30096446 Setaria italica
Seita.6G177100 0.5kb downstream 0.5kb downstream 5689 true scaffold_6: 30096447-30102135 Setaria italica
Seita.6G177100 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 30101636-30102135 Setaria italica
Seita.6G177100 1.0kb upstream 1.0kb upstream 6189 true scaffold_6: 30095447-30101635 Setaria italica
Seita.6G177100 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 30095447-30096446 Setaria italica
Seita.6G177100 1.0kb downstream 1.0kb downstream 6189 true scaffold_6: 30096447-30102635 Setaria italica
Seita.6G177100 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 30101636-30102635 Setaria italica
Seita.6G177100 2.0kb upstream 2.0kb upstream 7189 true scaffold_6: 30094447-30101635 Setaria italica
Seita.6G177100 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 30094447-30096446 Setaria italica
Seita.6G177100 2.0kb downstream 2.0kb downstream 7189 true scaffold_6: 30096447-30103635 Setaria italica
Seita.6G177100 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 30101636-30103635 Setaria italica
Seita.6G177100 5.0kb upstream 5.0kb upstream 10189 true scaffold_6: 30091447-30101635 Setaria italica
Seita.6G177100 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 30091447-30096446 Setaria italica
Seita.6G177100 5.0kb downstream 5.0kb downstream 10189 true scaffold_6: 30096447-30106635 Setaria italica
Seita.6G177100 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 30101636-30106635 Setaria italica
Seita.6G177100 10.0kb upstream 10.0kb upstream 15189 true scaffold_6: 30086447-30101635 Setaria italica
Seita.6G177100 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 30086447-30096446 Setaria italica
Seita.6G177100 10.0kb downstream 10.0kb downstream 15189 true scaffold_6: 30096447-30111635 Setaria italica
Seita.6G177100 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 30101636-30111635 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175211 5267 Panicoideae View MSA
124586448 5269 Grass View MSA
122047942 5273 Angiosperm View MSA
121345202 5274 Embryophyte View MSA
123424017 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.666        
cufflinks 1.17        
cufflinks 0.089        
cufflinks 0.016     Low Low
cufflinks 0.034     Low Low
cufflinks 1.215        
cufflinks 0.688        
cufflinks 1.148        
cufflinks 0.62        
cufflinks 0.958        
cufflinks 1.014        
cufflinks 0.635        
cufflinks 0.47        
cufflinks 0.194        
cufflinks 1.086        
cufflinks 0.078     Low Low
cufflinks 1.173        
cufflinks 0.033     Low Low
cufflinks 0.064     Low Low
cufflinks 1.13        

0 Strain