Gene : Seita.6G183500 S. italica v2.2
Defline:  (1 of 5) KOG1200 - Mitochondrial/plastidial beta-ketoacyl-ACP reductase Genomic Order:  1835
Name:  ? Seita.6G183500 Secondary Identifier:  ? PAC:32701044
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G183500 0.5kb upstream 0.5kb upstream 5049 true scaffold_6: 30769254-30774302 Setaria italica
Seita.6G183500 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 30773803-30774302 Setaria italica
Seita.6G183500 0.5kb downstream 0.5kb downstream 5049 true scaffold_6: 30768754-30773802 Setaria italica
Seita.6G183500 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 30768754-30769253 Setaria italica
Seita.6G183500 1.0kb upstream 1.0kb upstream 5549 true scaffold_6: 30769254-30774802 Setaria italica
Seita.6G183500 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 30773803-30774802 Setaria italica
Seita.6G183500 1.0kb downstream 1.0kb downstream 5549 true scaffold_6: 30768254-30773802 Setaria italica
Seita.6G183500 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 30768254-30769253 Setaria italica
Seita.6G183500 2.0kb upstream 2.0kb upstream 6549 true scaffold_6: 30769254-30775802 Setaria italica
Seita.6G183500 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 30773803-30775802 Setaria italica
Seita.6G183500 2.0kb downstream 2.0kb downstream 6549 true scaffold_6: 30767254-30773802 Setaria italica
Seita.6G183500 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 30767254-30769253 Setaria italica
Seita.6G183500 5.0kb upstream 5.0kb upstream 9549 true scaffold_6: 30769254-30778802 Setaria italica
Seita.6G183500 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 30773803-30778802 Setaria italica
Seita.6G183500 5.0kb downstream 5.0kb downstream 9549 true scaffold_6: 30764254-30773802 Setaria italica
Seita.6G183500 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 30764254-30769253 Setaria italica
Seita.6G183500 10.0kb upstream 10.0kb upstream 14549 true scaffold_6: 30769254-30783802 Setaria italica
Seita.6G183500 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 30773803-30783802 Setaria italica
Seita.6G183500 10.0kb downstream 10.0kb downstream 14549 true scaffold_6: 30759254-30773802 Setaria italica
Seita.6G183500 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 30759254-30769253 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178686 5267 Panicoideae View MSA
124577156 5269 Grass View MSA
122042834 5273 Angiosperm View MSA
121346352 5274 Embryophyte View MSA
123423987 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.583        
cufflinks 0.176        
cufflinks 0.935        
cufflinks 2.887       High
cufflinks 4.201       High
cufflinks 0.269        
cufflinks 1.218        
cufflinks 1.811        
cufflinks 1.624        
cufflinks 0.928        
cufflinks 0.857        
cufflinks 0.088     Low Low
cufflinks 0.208        
cufflinks 0.652        
cufflinks 0.034     Low Low
cufflinks 1.76        
cufflinks 0.106     Low Low
cufflinks 4.355       High
cufflinks 0.309        
cufflinks 0.112     Low Low

0 Strain