Gene : Seita.6G126100 S. italica v2.2
Defline:  (1 of 1) PTHR10245//PTHR10245:SF33 - ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 Genomic Order:  1261
Name:  ? Seita.6G126100 Secondary Identifier:  ? PAC:32700217
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G126100 0.5kb upstream 0.5kb upstream 3715 true scaffold_6: 21615984-21619698 Setaria italica
Seita.6G126100 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 21615984-21616483 Setaria italica
Seita.6G126100 0.5kb downstream 0.5kb downstream 3715 true scaffold_6: 21616484-21620198 Setaria italica
Seita.6G126100 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 21619699-21620198 Setaria italica
Seita.6G126100 1.0kb upstream 1.0kb upstream 4215 true scaffold_6: 21615484-21619698 Setaria italica
Seita.6G126100 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 21615484-21616483 Setaria italica
Seita.6G126100 1.0kb downstream 1.0kb downstream 4215 true scaffold_6: 21616484-21620698 Setaria italica
Seita.6G126100 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 21619699-21620698 Setaria italica
Seita.6G126100 2.0kb upstream 2.0kb upstream 5215 true scaffold_6: 21614484-21619698 Setaria italica
Seita.6G126100 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 21614484-21616483 Setaria italica
Seita.6G126100 2.0kb downstream 2.0kb downstream 5215 true scaffold_6: 21616484-21621698 Setaria italica
Seita.6G126100 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 21619699-21621698 Setaria italica
Seita.6G126100 5.0kb upstream 5.0kb upstream 8215 true scaffold_6: 21611484-21619698 Setaria italica
Seita.6G126100 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 21611484-21616483 Setaria italica
Seita.6G126100 5.0kb downstream 5.0kb downstream 8215 true scaffold_6: 21616484-21624698 Setaria italica
Seita.6G126100 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 21619699-21624698 Setaria italica
Seita.6G126100 10.0kb upstream 10.0kb upstream 13215 true scaffold_6: 21606484-21619698 Setaria italica
Seita.6G126100 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 21606484-21616483 Setaria italica
Seita.6G126100 10.0kb downstream 10.0kb downstream 13215 true scaffold_6: 21616484-21629698 Setaria italica
Seita.6G126100 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 21619699-21629698 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195635 5267 Panicoideae View MSA
124576462 5269 Grass View MSA
122045533 5273 Angiosperm View MSA
121346970 5274 Embryophyte View MSA
123424283 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.256     High Low
cufflinks 92.599     High  
cufflinks 87.679     High  
cufflinks 106.566     High High
cufflinks 97.411     High High
cufflinks 82.756     High  
cufflinks 79.497     High  
cufflinks 99.852     High High
cufflinks 84.406     High  
cufflinks 103.336     High High
cufflinks 68.006     High Low
cufflinks 76.23     High  
cufflinks 91.675     High  
cufflinks 96.178     High  
cufflinks 82.216     High  
cufflinks 61.455     High Low
cufflinks 80.281     High  
cufflinks 66.306     High Low
cufflinks 81.316     High  
cufflinks 68.951     High Low

0 Strain