Gene : Seita.6G132900 S. italica v2.2
Defline:  (1 of 2) PTHR19359//PTHR19359:SF10 - CYTOCHROME B5 Genomic Order:  1329
Name:  ? Seita.6G132900 Secondary Identifier:  ? PAC:32699882
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G132900 0.5kb upstream 0.5kb upstream 4021 true scaffold_6: 23661882-23665902 Setaria italica
Seita.6G132900 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 23665403-23665902 Setaria italica
Seita.6G132900 0.5kb downstream 0.5kb downstream 4021 true scaffold_6: 23661382-23665402 Setaria italica
Seita.6G132900 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 23661382-23661881 Setaria italica
Seita.6G132900 1.0kb upstream 1.0kb upstream 4521 true scaffold_6: 23661882-23666402 Setaria italica
Seita.6G132900 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 23665403-23666402 Setaria italica
Seita.6G132900 1.0kb downstream 1.0kb downstream 4521 true scaffold_6: 23660882-23665402 Setaria italica
Seita.6G132900 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 23660882-23661881 Setaria italica
Seita.6G132900 2.0kb upstream 2.0kb upstream 5521 true scaffold_6: 23661882-23667402 Setaria italica
Seita.6G132900 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 23665403-23667402 Setaria italica
Seita.6G132900 2.0kb downstream 2.0kb downstream 5521 true scaffold_6: 23659882-23665402 Setaria italica
Seita.6G132900 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 23659882-23661881 Setaria italica
Seita.6G132900 5.0kb upstream 5.0kb upstream 8521 true scaffold_6: 23661882-23670402 Setaria italica
Seita.6G132900 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 23665403-23670402 Setaria italica
Seita.6G132900 5.0kb downstream 5.0kb downstream 8521 true scaffold_6: 23656882-23665402 Setaria italica
Seita.6G132900 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 23656882-23661881 Setaria italica
Seita.6G132900 10.0kb upstream 10.0kb upstream 13521 true scaffold_6: 23661882-23675402 Setaria italica
Seita.6G132900 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 23665403-23675402 Setaria italica
Seita.6G132900 10.0kb downstream 10.0kb downstream 13521 true scaffold_6: 23651882-23665402 Setaria italica
Seita.6G132900 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 23651882-23661881 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027755 5273 Angiosperm View MSA
122185320 5267 Panicoideae View MSA
124583560 5269 Grass View MSA
121344090 5274 Embryophyte View MSA
123428511 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.637        
cufflinks 3.61       High
cufflinks 1.662        
cufflinks 1.288       Low
cufflinks 1.218       Low
cufflinks 3.895       High
cufflinks 2.674        
cufflinks 3.118        
cufflinks 1.72        
cufflinks 3.44        
cufflinks 2.878        
cufflinks 2.515        
cufflinks 2.401        
cufflinks 1.512        
cufflinks 3.491       High
cufflinks 1.651        
cufflinks 3.495       High
cufflinks 1.11       Low
cufflinks 1.277       Low
cufflinks 3.613       High

0 Strain