Gene : Seita.7G013100 S. italica v2.2
Defline:  (1 of 3) PTHR12210:SF71 - SCP1-LIKE SMALL PHOSPHATASE 4-RELATED Genomic Order:  131
Name:  ? Seita.7G013100 Secondary Identifier:  ? PAC:32705424
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G013100 0.5kb upstream 0.5kb upstream 7653 true scaffold_7: 2252597-2260249 Setaria italica
Seita.7G013100 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2252597-2253096 Setaria italica
Seita.7G013100 0.5kb downstream 0.5kb downstream 7653 true scaffold_7: 2253097-2260749 Setaria italica
Seita.7G013100 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2260250-2260749 Setaria italica
Seita.7G013100 1.0kb upstream 1.0kb upstream 8153 true scaffold_7: 2252097-2260249 Setaria italica
Seita.7G013100 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2252097-2253096 Setaria italica
Seita.7G013100 1.0kb downstream 1.0kb downstream 8153 true scaffold_7: 2253097-2261249 Setaria italica
Seita.7G013100 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2260250-2261249 Setaria italica
Seita.7G013100 2.0kb upstream 2.0kb upstream 9153 true scaffold_7: 2251097-2260249 Setaria italica
Seita.7G013100 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2251097-2253096 Setaria italica
Seita.7G013100 2.0kb downstream 2.0kb downstream 9153 true scaffold_7: 2253097-2262249 Setaria italica
Seita.7G013100 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2260250-2262249 Setaria italica
Seita.7G013100 5.0kb upstream 5.0kb upstream 12153 true scaffold_7: 2248097-2260249 Setaria italica
Seita.7G013100 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2248097-2253096 Setaria italica
Seita.7G013100 5.0kb downstream 5.0kb downstream 12153 true scaffold_7: 2253097-2265249 Setaria italica
Seita.7G013100 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2260250-2265249 Setaria italica
Seita.7G013100 10.0kb upstream 10.0kb upstream 17153 true scaffold_7: 2243097-2260249 Setaria italica
Seita.7G013100 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2243097-2253096 Setaria italica
Seita.7G013100 10.0kb downstream 10.0kb downstream 17153 true scaffold_7: 2253097-2270249 Setaria italica
Seita.7G013100 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2260250-2270249 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180115 5267 Panicoideae View MSA
124585738 5269 Grass View MSA
122048249 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121310904 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.175        
cufflinks 5.072       High
cufflinks 3.158        
cufflinks 2.831        
cufflinks 2.666        
cufflinks 5.383       High
cufflinks 2.878        
cufflinks 3.145        
cufflinks 3.213        
cufflinks 2.508        
cufflinks 2.755        
cufflinks 2.798        
cufflinks 2.735        
cufflinks 2.484        
cufflinks 3.074        
cufflinks 2.552        
cufflinks 3.212        
cufflinks 4.024       High
cufflinks 2.422       Low
cufflinks 3.086        

0 Strain