Gene : Seita.6G212900 S. italica v2.2
Defline:  (1 of 14) KOG0752 - Mitochondrial solute carrier protein Genomic Order:  2129
Name:  ? Seita.6G212900 Secondary Identifier:  ? PAC:32699574
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G212900 0.5kb upstream 0.5kb upstream 4648 true scaffold_6: 33021067-33025714 Setaria italica
Seita.6G212900 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 33025215-33025714 Setaria italica
Seita.6G212900 0.5kb downstream 0.5kb downstream 4648 true scaffold_6: 33020567-33025214 Setaria italica
Seita.6G212900 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 33020567-33021066 Setaria italica
Seita.6G212900 1.0kb upstream 1.0kb upstream 5148 true scaffold_6: 33021067-33026214 Setaria italica
Seita.6G212900 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 33025215-33026214 Setaria italica
Seita.6G212900 1.0kb downstream 1.0kb downstream 5148 true scaffold_6: 33020067-33025214 Setaria italica
Seita.6G212900 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 33020067-33021066 Setaria italica
Seita.6G212900 2.0kb upstream 2.0kb upstream 6148 true scaffold_6: 33021067-33027214 Setaria italica
Seita.6G212900 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 33025215-33027214 Setaria italica
Seita.6G212900 2.0kb downstream 2.0kb downstream 6148 true scaffold_6: 33019067-33025214 Setaria italica
Seita.6G212900 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 33019067-33021066 Setaria italica
Seita.6G212900 5.0kb upstream 5.0kb upstream 9148 true scaffold_6: 33021067-33030214 Setaria italica
Seita.6G212900 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 33025215-33030214 Setaria italica
Seita.6G212900 5.0kb downstream 5.0kb downstream 9148 true scaffold_6: 33016067-33025214 Setaria italica
Seita.6G212900 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 33016067-33021066 Setaria italica
Seita.6G212900 10.0kb upstream 10.0kb upstream 14148 true scaffold_6: 33021067-33035214 Setaria italica
Seita.6G212900 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 33025215-33035214 Setaria italica
Seita.6G212900 10.0kb downstream 10.0kb downstream 14148 true scaffold_6: 33011067-33025214 Setaria italica
Seita.6G212900 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 33011067-33021066 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191563 5267 Panicoideae View MSA
124571616 5269 Grass View MSA
122043047 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121348087 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.267        
cufflinks 12.077        
cufflinks 18.699     High  
cufflinks 20.192     High  
cufflinks 18.609     High  
cufflinks 16.223     High  
cufflinks 28.871     High High
cufflinks 8.3        
cufflinks 49.535     High High
cufflinks 5.988        
cufflinks 4.547        
cufflinks 3.725       Low
cufflinks 2.945       Low
cufflinks 98.072     High High
cufflinks 4.324        
cufflinks 4.626        
cufflinks 6.619        
cufflinks 11.18        
cufflinks 14.898     High  
cufflinks 5.787        

0 Strain