Gene : Seita.6G231600 S. italica v2.2
Defline:  (1 of 3) PTHR10804:SF9 - METHIONINE AMINOPEPTIDASE 2 Genomic Order:  2316
Name:  ? Seita.6G231600 Secondary Identifier:  ? PAC:32699667
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G231600 0.5kb upstream 0.5kb upstream 4602 true scaffold_6: 34414472-34419073 Setaria italica
Seita.6G231600 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 34414472-34414971 Setaria italica
Seita.6G231600 0.5kb downstream 0.5kb downstream 4602 true scaffold_6: 34414972-34419573 Setaria italica
Seita.6G231600 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 34419074-34419573 Setaria italica
Seita.6G231600 1.0kb upstream 1.0kb upstream 5102 true scaffold_6: 34413972-34419073 Setaria italica
Seita.6G231600 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 34413972-34414971 Setaria italica
Seita.6G231600 1.0kb downstream 1.0kb downstream 5102 true scaffold_6: 34414972-34420073 Setaria italica
Seita.6G231600 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 34419074-34420073 Setaria italica
Seita.6G231600 2.0kb upstream 2.0kb upstream 6102 true scaffold_6: 34412972-34419073 Setaria italica
Seita.6G231600 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 34412972-34414971 Setaria italica
Seita.6G231600 2.0kb downstream 2.0kb downstream 6102 true scaffold_6: 34414972-34421073 Setaria italica
Seita.6G231600 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 34419074-34421073 Setaria italica
Seita.6G231600 5.0kb upstream 5.0kb upstream 9102 true scaffold_6: 34409972-34419073 Setaria italica
Seita.6G231600 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 34409972-34414971 Setaria italica
Seita.6G231600 5.0kb downstream 5.0kb downstream 9102 true scaffold_6: 34414972-34424073 Setaria italica
Seita.6G231600 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 34419074-34424073 Setaria italica
Seita.6G231600 10.0kb upstream 10.0kb upstream 14102 true scaffold_6: 34404972-34419073 Setaria italica
Seita.6G231600 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 34404972-34414971 Setaria italica
Seita.6G231600 10.0kb downstream 10.0kb downstream 14102 true scaffold_6: 34414972-34429073 Setaria italica
Seita.6G231600 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 34419074-34429073 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189331 5267 Panicoideae View MSA
124574427 5269 Grass View MSA
122044459 5273 Angiosperm View MSA
121345658 5274 Embryophyte View MSA
123424700 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.104        
cufflinks 5.818       Low
cufflinks 11.255     High  
cufflinks 11.891     High  
cufflinks 8.833        
cufflinks 6.297       Low
cufflinks 4.963       Low
cufflinks 8.841        
cufflinks 6.134       Low
cufflinks 9.524        
cufflinks 8.552        
cufflinks 14.723     High High
cufflinks 10.905        
cufflinks 9.12        
cufflinks 8.903        
cufflinks 6.4       Low
cufflinks 12.645       High
cufflinks 14.507     High High
cufflinks 9.635        
cufflinks 9.391        

0 Strain