Gene : Seita.7G077900 S. italica v2.2
Defline:  (1 of 6) PF03114 - BAR domain (BAR) Genomic Order:  779
Name:  ? Seita.7G077900 Secondary Identifier:  ? PAC:32704221
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G077900 0.5kb upstream 0.5kb upstream 7536 true scaffold_7: 18185432-18192967 Setaria italica
Seita.7G077900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 18192468-18192967 Setaria italica
Seita.7G077900 0.5kb downstream 0.5kb downstream 7536 true scaffold_7: 18184932-18192467 Setaria italica
Seita.7G077900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 18184932-18185431 Setaria italica
Seita.7G077900 1.0kb upstream 1.0kb upstream 8036 true scaffold_7: 18185432-18193467 Setaria italica
Seita.7G077900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 18192468-18193467 Setaria italica
Seita.7G077900 1.0kb downstream 1.0kb downstream 8036 true scaffold_7: 18184432-18192467 Setaria italica
Seita.7G077900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 18184432-18185431 Setaria italica
Seita.7G077900 2.0kb upstream 2.0kb upstream 9036 true scaffold_7: 18185432-18194467 Setaria italica
Seita.7G077900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 18192468-18194467 Setaria italica
Seita.7G077900 2.0kb downstream 2.0kb downstream 9036 true scaffold_7: 18183432-18192467 Setaria italica
Seita.7G077900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 18183432-18185431 Setaria italica
Seita.7G077900 5.0kb upstream 5.0kb upstream 12036 true scaffold_7: 18185432-18197467 Setaria italica
Seita.7G077900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 18192468-18197467 Setaria italica
Seita.7G077900 5.0kb downstream 5.0kb downstream 12036 true scaffold_7: 18180432-18192467 Setaria italica
Seita.7G077900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 18180432-18185431 Setaria italica
Seita.7G077900 10.0kb upstream 10.0kb upstream 17036 true scaffold_7: 18185432-18202467 Setaria italica
Seita.7G077900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 18192468-18202467 Setaria italica
Seita.7G077900 10.0kb downstream 10.0kb downstream 17036 true scaffold_7: 18175432-18192467 Setaria italica
Seita.7G077900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 18175432-18185431 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190124 5267 Panicoideae View MSA
124577984 5269 Grass View MSA
122041909 5273 Angiosperm View MSA
121348701 5274 Embryophyte View MSA
123380980 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.136        
cufflinks 2.709        
cufflinks 4.443        
cufflinks 4.246        
cufflinks 3.465        
cufflinks 2.715        
cufflinks 3.304        
cufflinks 2.573       Low
cufflinks 2.144       Low
cufflinks 5.046        
cufflinks 4.05        
cufflinks 13.954     High High
cufflinks 9.148       High
cufflinks 5.242        
cufflinks 10.717       High
cufflinks 2.573       Low
cufflinks 9.824       High
cufflinks 3.102        
cufflinks 4.404        
cufflinks 11.114       High

0 Strain