Gene : Seita.7G089300 S. italica v2.2
Genomic Order:  893 Name:  ? Seita.7G089300
Secondary Identifier:  ? PAC:32705611
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G089300 0.5kb upstream 0.5kb upstream 5336 true scaffold_7: 19336963-19342298 Setaria italica
Seita.7G089300 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 19336963-19337462 Setaria italica
Seita.7G089300 0.5kb downstream 0.5kb downstream 5336 true scaffold_7: 19337463-19342798 Setaria italica
Seita.7G089300 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 19342299-19342798 Setaria italica
Seita.7G089300 1.0kb upstream 1.0kb upstream 5836 true scaffold_7: 19336463-19342298 Setaria italica
Seita.7G089300 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 19336463-19337462 Setaria italica
Seita.7G089300 1.0kb downstream 1.0kb downstream 5836 true scaffold_7: 19337463-19343298 Setaria italica
Seita.7G089300 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 19342299-19343298 Setaria italica
Seita.7G089300 2.0kb upstream 2.0kb upstream 6836 true scaffold_7: 19335463-19342298 Setaria italica
Seita.7G089300 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 19335463-19337462 Setaria italica
Seita.7G089300 2.0kb downstream 2.0kb downstream 6836 true scaffold_7: 19337463-19344298 Setaria italica
Seita.7G089300 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 19342299-19344298 Setaria italica
Seita.7G089300 5.0kb upstream 5.0kb upstream 9836 true scaffold_7: 19332463-19342298 Setaria italica
Seita.7G089300 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 19332463-19337462 Setaria italica
Seita.7G089300 5.0kb downstream 5.0kb downstream 9836 true scaffold_7: 19337463-19347298 Setaria italica
Seita.7G089300 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 19342299-19347298 Setaria italica
Seita.7G089300 10.0kb upstream 10.0kb upstream 14836 true scaffold_7: 19327463-19342298 Setaria italica
Seita.7G089300 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 19327463-19337462 Setaria italica
Seita.7G089300 10.0kb downstream 10.0kb downstream 14836 true scaffold_7: 19337463-19352298 Setaria italica
Seita.7G089300 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 19342299-19352298 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183846 5267 Panicoideae View MSA
124576293 5269 Grass View MSA
122041873 5273 Angiosperm View MSA
121343989 5274 Embryophyte View MSA
123379952 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.72        
cufflinks 0.993        
cufflinks 0.709        
cufflinks 0.469       Low
cufflinks 0.64        
cufflinks 0.924        
cufflinks 0.696        
cufflinks 0.885        
cufflinks 1.02        
cufflinks 0.529       Low
cufflinks 0.772        
cufflinks 1.026        
cufflinks 0.931        
cufflinks 0.819        
cufflinks 0.93        
cufflinks 0.886        
cufflinks 1.036       High
cufflinks 1.026        
cufflinks 0.48       Low
cufflinks 0.942        

0 Strain