Gene : Seita.7G110400 S. italica v2.2
Defline:  (1 of 1) PTHR31989:SF18 - PROTEIN BEARSKIN1 Genomic Order:  1104
Name:  ? Seita.7G110400 Secondary Identifier:  ? PAC:32703441
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G110400 0.5kb upstream 0.5kb upstream 2338 true scaffold_7: 21067508-21069845 Setaria italica
Seita.7G110400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 21069346-21069845 Setaria italica
Seita.7G110400 0.5kb downstream 0.5kb downstream 2338 true scaffold_7: 21067008-21069345 Setaria italica
Seita.7G110400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 21067008-21067507 Setaria italica
Seita.7G110400 1.0kb upstream 1.0kb upstream 2838 true scaffold_7: 21067508-21070345 Setaria italica
Seita.7G110400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 21069346-21070345 Setaria italica
Seita.7G110400 1.0kb downstream 1.0kb downstream 2838 true scaffold_7: 21066508-21069345 Setaria italica
Seita.7G110400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 21066508-21067507 Setaria italica
Seita.7G110400 2.0kb upstream 2.0kb upstream 3838 true scaffold_7: 21067508-21071345 Setaria italica
Seita.7G110400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 21069346-21071345 Setaria italica
Seita.7G110400 2.0kb downstream 2.0kb downstream 3838 true scaffold_7: 21065508-21069345 Setaria italica
Seita.7G110400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 21065508-21067507 Setaria italica
Seita.7G110400 5.0kb upstream 5.0kb upstream 6838 true scaffold_7: 21067508-21074345 Setaria italica
Seita.7G110400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 21069346-21074345 Setaria italica
Seita.7G110400 5.0kb downstream 5.0kb downstream 6838 true scaffold_7: 21062508-21069345 Setaria italica
Seita.7G110400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 21062508-21067507 Setaria italica
Seita.7G110400 10.0kb upstream 10.0kb upstream 11838 true scaffold_7: 21067508-21079345 Setaria italica
Seita.7G110400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 21069346-21079345 Setaria italica
Seita.7G110400 10.0kb downstream 10.0kb downstream 11838 true scaffold_7: 21057508-21069345 Setaria italica
Seita.7G110400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 21057508-21067507 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178661 5267 Panicoideae View MSA
124583563 5269 Grass View MSA
122046841 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low Low
cufflinks 0.019     Low Low
cufflinks 0.014     Low Low
cufflinks 0.028     Low  
cufflinks 0.02     Low  
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.272        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.897        
cufflinks 0.047     Low  
cufflinks 1.782       High
cufflinks 0.785        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.233       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.539       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.557       High

0 Strain