Gene : Seita.7G051100 S. italica v2.2

Defline:  (1 of 2) PTHR13980 - CDC68 RELATED Genomic Order:  511
Name:  ? Seita.7G051100 Secondary Identifier:  ? PAC:32704311

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G051100 0.5kb upstream 0.5kb upstream 6771 true scaffold_7: 14639045-14645815 Setaria italica
Seita.7G051100 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 14639045-14639544 Setaria italica
Seita.7G051100 0.5kb downstream 0.5kb downstream 6771 true scaffold_7: 14639545-14646315 Setaria italica
Seita.7G051100 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 14645816-14646315 Setaria italica
Seita.7G051100 1.0kb upstream 1.0kb upstream 7271 true scaffold_7: 14638545-14645815 Setaria italica
Seita.7G051100 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 14638545-14639544 Setaria italica
Seita.7G051100 1.0kb downstream 1.0kb downstream 7271 true scaffold_7: 14639545-14646815 Setaria italica
Seita.7G051100 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 14645816-14646815 Setaria italica
Seita.7G051100 2.0kb upstream 2.0kb upstream 8271 true scaffold_7: 14637545-14645815 Setaria italica
Seita.7G051100 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 14637545-14639544 Setaria italica
Seita.7G051100 2.0kb downstream 2.0kb downstream 8271 true scaffold_7: 14639545-14647815 Setaria italica
Seita.7G051100 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 14645816-14647815 Setaria italica
Seita.7G051100 5.0kb upstream 5.0kb upstream 11271 true scaffold_7: 14634545-14645815 Setaria italica
Seita.7G051100 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 14634545-14639544 Setaria italica
Seita.7G051100 5.0kb downstream 5.0kb downstream 11271 true scaffold_7: 14639545-14650815 Setaria italica
Seita.7G051100 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 14645816-14650815 Setaria italica
Seita.7G051100 10.0kb upstream 10.0kb upstream 16271 true scaffold_7: 14629545-14645815 Setaria italica
Seita.7G051100 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 14629545-14639544 Setaria italica
Seita.7G051100 10.0kb downstream 10.0kb downstream 16271 true scaffold_7: 14639545-14655815 Setaria italica
Seita.7G051100 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 14645816-14655815 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184717 5267 Panicoideae View MSA
124571547 5269 Grass View MSA
122047619 5273 Angiosperm View MSA
121344342 5274 Embryophyte View MSA
123426084 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.848     High  
cufflinks 30.43     High High
cufflinks 22.899     High  
cufflinks 17.09     High  
cufflinks 14.709     High Low
cufflinks 29.723     High High
cufflinks 23.049     High  
cufflinks 15.272     High  
cufflinks 17.684     High  
cufflinks 9.052       Low
cufflinks 23.597     High  
cufflinks 23.535     High  
cufflinks 16.16     High  
cufflinks 19.621     High  
cufflinks 24.021     High  
cufflinks 22.692     High  
cufflinks 18.653     High  
cufflinks 39.779     High High
cufflinks 18.977     High  
cufflinks 20.494     High  

0 Strain