Gene : Seita.7G055700 S. italica v2.2
Defline:  (1 of 1) KOG2300 - Uncharacterized conserved protein Genomic Order:  557
Name:  ? Seita.7G055700 Secondary Identifier:  ? PAC:32703756
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G055700 0.5kb upstream 0.5kb upstream 6346 true scaffold_7: 15451748-15458093 Setaria italica
Seita.7G055700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 15451748-15452247 Setaria italica
Seita.7G055700 0.5kb downstream 0.5kb downstream 6346 true scaffold_7: 15452248-15458593 Setaria italica
Seita.7G055700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 15458094-15458593 Setaria italica
Seita.7G055700 1.0kb upstream 1.0kb upstream 6846 true scaffold_7: 15451248-15458093 Setaria italica
Seita.7G055700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 15451248-15452247 Setaria italica
Seita.7G055700 1.0kb downstream 1.0kb downstream 6846 true scaffold_7: 15452248-15459093 Setaria italica
Seita.7G055700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 15458094-15459093 Setaria italica
Seita.7G055700 2.0kb upstream 2.0kb upstream 7846 true scaffold_7: 15450248-15458093 Setaria italica
Seita.7G055700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 15450248-15452247 Setaria italica
Seita.7G055700 2.0kb downstream 2.0kb downstream 7846 true scaffold_7: 15452248-15460093 Setaria italica
Seita.7G055700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 15458094-15460093 Setaria italica
Seita.7G055700 5.0kb upstream 5.0kb upstream 10846 true scaffold_7: 15447248-15458093 Setaria italica
Seita.7G055700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 15447248-15452247 Setaria italica
Seita.7G055700 5.0kb downstream 5.0kb downstream 10846 true scaffold_7: 15452248-15463093 Setaria italica
Seita.7G055700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 15458094-15463093 Setaria italica
Seita.7G055700 10.0kb upstream 10.0kb upstream 15846 true scaffold_7: 15442248-15458093 Setaria italica
Seita.7G055700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 15442248-15452247 Setaria italica
Seita.7G055700 10.0kb downstream 10.0kb downstream 15846 true scaffold_7: 15452248-15468093 Setaria italica
Seita.7G055700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 15458094-15468093 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041098 5273 Angiosperm View MSA
122175769 5267 Panicoideae View MSA
124581132 5269 Grass View MSA
121346480 5274 Embryophyte View MSA
123425997 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.089        
cufflinks 4.089        
cufflinks 3.564        
cufflinks 2.805       Low
cufflinks 2.691       Low
cufflinks 4.418       High
cufflinks 4.094        
cufflinks 3.363        
cufflinks 2.55       Low
cufflinks 2.678       Low
cufflinks 3.186        
cufflinks 3.92        
cufflinks 2.922       Low
cufflinks 4.093        
cufflinks 4.266        
cufflinks 3.558        
cufflinks 4.218        
cufflinks 4.343       High
cufflinks 3.08        
cufflinks 4.163        

0 Strain