Gene : Seita.7G069900 S. italica v2.2
Defline:  (1 of 2) PTHR31945:SF17 - TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR Genomic Order:  699
Name:  ? Seita.7G069900 Secondary Identifier:  ? PAC:32703707
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G069900 0.5kb upstream 0.5kb upstream 2435 true scaffold_7: 17393994-17396428 Setaria italica
Seita.7G069900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 17393994-17394493 Setaria italica
Seita.7G069900 0.5kb downstream 0.5kb downstream 2435 true scaffold_7: 17394494-17396928 Setaria italica
Seita.7G069900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 17396429-17396928 Setaria italica
Seita.7G069900 1.0kb upstream 1.0kb upstream 2935 true scaffold_7: 17393494-17396428 Setaria italica
Seita.7G069900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 17393494-17394493 Setaria italica
Seita.7G069900 1.0kb downstream 1.0kb downstream 2935 true scaffold_7: 17394494-17397428 Setaria italica
Seita.7G069900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 17396429-17397428 Setaria italica
Seita.7G069900 2.0kb upstream 2.0kb upstream 3935 true scaffold_7: 17392494-17396428 Setaria italica
Seita.7G069900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 17392494-17394493 Setaria italica
Seita.7G069900 2.0kb downstream 2.0kb downstream 3935 true scaffold_7: 17394494-17398428 Setaria italica
Seita.7G069900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 17396429-17398428 Setaria italica
Seita.7G069900 5.0kb upstream 5.0kb upstream 6935 true scaffold_7: 17389494-17396428 Setaria italica
Seita.7G069900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 17389494-17394493 Setaria italica
Seita.7G069900 5.0kb downstream 5.0kb downstream 6935 true scaffold_7: 17394494-17401428 Setaria italica
Seita.7G069900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 17396429-17401428 Setaria italica
Seita.7G069900 10.0kb upstream 10.0kb upstream 11935 true scaffold_7: 17384494-17396428 Setaria italica
Seita.7G069900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 17384494-17394493 Setaria italica
Seita.7G069900 10.0kb downstream 10.0kb downstream 11935 true scaffold_7: 17394494-17406428 Setaria italica
Seita.7G069900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 17396429-17406428 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194671 5267 Panicoideae View MSA
124580428 5269 Grass View MSA
122047827 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.045     Low  
cufflinks 0.077     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.075     Low  
cufflinks 0.255        
cufflinks 0.044     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.428        
cufflinks 0.047     Low  
cufflinks 0.578        
cufflinks 0.619        
cufflinks 0.028     Low Low
cufflinks 1.442       High
cufflinks 0.011     Low Low
cufflinks 1.201       High
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.586       High

0 Strain