Gene : Seita.7G160200 S. italica v2.2
Defline:  (1 of 3) PTHR11880:SF9 - RIBOSOMAL PROTEIN S19, MITOCHONDRIAL Genomic Order:  1602
Name:  ? Seita.7G160200 Secondary Identifier:  ? PAC:32704280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G160200 0.5kb upstream 0.5kb upstream 782 true scaffold_7: 24459868-24460649 Setaria italica
Seita.7G160200 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 24460150-24460649 Setaria italica
Seita.7G160200 0.5kb downstream 0.5kb downstream 782 true scaffold_7: 24459368-24460149 Setaria italica
Seita.7G160200 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 24459368-24459867 Setaria italica
Seita.7G160200 1.0kb upstream 1.0kb upstream 1282 true scaffold_7: 24459868-24461149 Setaria italica
Seita.7G160200 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 24460150-24461149 Setaria italica
Seita.7G160200 1.0kb downstream 1.0kb downstream 1282 true scaffold_7: 24458868-24460149 Setaria italica
Seita.7G160200 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 24458868-24459867 Setaria italica
Seita.7G160200 2.0kb upstream 2.0kb upstream 2282 true scaffold_7: 24459868-24462149 Setaria italica
Seita.7G160200 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 24460150-24462149 Setaria italica
Seita.7G160200 2.0kb downstream 2.0kb downstream 2282 true scaffold_7: 24457868-24460149 Setaria italica
Seita.7G160200 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 24457868-24459867 Setaria italica
Seita.7G160200 5.0kb upstream 5.0kb upstream 5282 true scaffold_7: 24459868-24465149 Setaria italica
Seita.7G160200 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 24460150-24465149 Setaria italica
Seita.7G160200 5.0kb downstream 5.0kb downstream 5282 true scaffold_7: 24454868-24460149 Setaria italica
Seita.7G160200 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 24454868-24459867 Setaria italica
Seita.7G160200 10.0kb upstream 10.0kb upstream 10282 true scaffold_7: 24459868-24470149 Setaria italica
Seita.7G160200 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 24460150-24470149 Setaria italica
Seita.7G160200 10.0kb downstream 10.0kb downstream 10282 true scaffold_7: 24449868-24460149 Setaria italica
Seita.7G160200 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 24449868-24459867 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028835 5273 Angiosperm View MSA
122178381 5267 Panicoideae View MSA
124590369 5269 Grass View MSA
121349820 5274 Embryophyte View MSA
123426657 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.574       High
cufflinks 0.072     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain