Gene : Seita.7G167200 S. italica v2.2
Genomic Order:  1672 Name:  ? Seita.7G167200
Secondary Identifier:  ? PAC:32702317
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G167200 0.5kb upstream 0.5kb upstream 3052 true scaffold_7: 24919203-24922254 Setaria italica
Seita.7G167200 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 24919203-24919702 Setaria italica
Seita.7G167200 0.5kb downstream 0.5kb downstream 3052 true scaffold_7: 24919703-24922754 Setaria italica
Seita.7G167200 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 24922255-24922754 Setaria italica
Seita.7G167200 1.0kb upstream 1.0kb upstream 3552 true scaffold_7: 24918703-24922254 Setaria italica
Seita.7G167200 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 24918703-24919702 Setaria italica
Seita.7G167200 1.0kb downstream 1.0kb downstream 3552 true scaffold_7: 24919703-24923254 Setaria italica
Seita.7G167200 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 24922255-24923254 Setaria italica
Seita.7G167200 2.0kb upstream 2.0kb upstream 4552 true scaffold_7: 24917703-24922254 Setaria italica
Seita.7G167200 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 24917703-24919702 Setaria italica
Seita.7G167200 2.0kb downstream 2.0kb downstream 4552 true scaffold_7: 24919703-24924254 Setaria italica
Seita.7G167200 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 24922255-24924254 Setaria italica
Seita.7G167200 5.0kb upstream 5.0kb upstream 7552 true scaffold_7: 24914703-24922254 Setaria italica
Seita.7G167200 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 24914703-24919702 Setaria italica
Seita.7G167200 5.0kb downstream 5.0kb downstream 7552 true scaffold_7: 24919703-24927254 Setaria italica
Seita.7G167200 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 24922255-24927254 Setaria italica
Seita.7G167200 10.0kb upstream 10.0kb upstream 12552 true scaffold_7: 24909703-24922254 Setaria italica
Seita.7G167200 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 24909703-24919702 Setaria italica
Seita.7G167200 10.0kb downstream 10.0kb downstream 12552 true scaffold_7: 24919703-24932254 Setaria italica
Seita.7G167200 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 24922255-24932254 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181617 5267 Panicoideae View MSA
124572626 5269 Grass View MSA
122044248 5273 Angiosperm View MSA
121349082 5274 Embryophyte View MSA
123381156 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.382     High  
cufflinks 16.067     High  
cufflinks 1.255       Low
cufflinks 2.648        
cufflinks 4.144        
cufflinks 16.716     High  
cufflinks 17.072     High  
cufflinks 20.546     High  
cufflinks 20.74     High  
cufflinks 19.561     High  
cufflinks 21.488     High High
cufflinks 4.777        
cufflinks 7.634        
cufflinks 0.33       Low
cufflinks 5.315        
cufflinks 7.737        
cufflinks 8.288        
cufflinks 4.794        
cufflinks 0.88       Low
cufflinks 6.876        

0 Strain