Gene : Seita.7G244600 S. italica v2.2
Defline:  (1 of 1) KOG0310 - Conserved WD40 repeat-containing protein Genomic Order:  2446
Name:  ? Seita.7G244600 Secondary Identifier:  ? PAC:32704464
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G244600 0.5kb upstream 0.5kb upstream 2516 true scaffold_7: 30459728-30462243 Setaria italica
Seita.7G244600 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 30461744-30462243 Setaria italica
Seita.7G244600 0.5kb downstream 0.5kb downstream 2516 true scaffold_7: 30459228-30461743 Setaria italica
Seita.7G244600 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 30459228-30459727 Setaria italica
Seita.7G244600 1.0kb upstream 1.0kb upstream 3016 true scaffold_7: 30459728-30462743 Setaria italica
Seita.7G244600 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 30461744-30462743 Setaria italica
Seita.7G244600 1.0kb downstream 1.0kb downstream 3016 true scaffold_7: 30458728-30461743 Setaria italica
Seita.7G244600 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 30458728-30459727 Setaria italica
Seita.7G244600 2.0kb upstream 2.0kb upstream 4016 true scaffold_7: 30459728-30463743 Setaria italica
Seita.7G244600 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 30461744-30463743 Setaria italica
Seita.7G244600 2.0kb downstream 2.0kb downstream 4016 true scaffold_7: 30457728-30461743 Setaria italica
Seita.7G244600 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 30457728-30459727 Setaria italica
Seita.7G244600 5.0kb upstream 5.0kb upstream 7016 true scaffold_7: 30459728-30466743 Setaria italica
Seita.7G244600 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 30461744-30466743 Setaria italica
Seita.7G244600 5.0kb downstream 5.0kb downstream 7016 true scaffold_7: 30454728-30461743 Setaria italica
Seita.7G244600 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 30454728-30459727 Setaria italica
Seita.7G244600 10.0kb upstream 10.0kb upstream 12016 true scaffold_7: 30459728-30471743 Setaria italica
Seita.7G244600 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 30461744-30471743 Setaria italica
Seita.7G244600 10.0kb downstream 10.0kb downstream 12016 true scaffold_7: 30449728-30461743 Setaria italica
Seita.7G244600 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 30449728-30459727 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041129 5273 Angiosperm View MSA
122187997 5267 Panicoideae View MSA
124579733 5269 Grass View MSA
121344745 5274 Embryophyte View MSA
123424806 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.68     High  
cufflinks 19.883     High High
cufflinks 5.432        
cufflinks 2.136       Low
cufflinks 4.877       Low
cufflinks 19.351     High High
cufflinks 11.887        
cufflinks 12.501        
cufflinks 14.947     High  
cufflinks 14.825        
cufflinks 19.641     High High
cufflinks 9.059        
cufflinks 5.216       Low
cufflinks 8.758        
cufflinks 14.057        
cufflinks 8.825        
cufflinks 13.842        
cufflinks 8.638        
cufflinks 3.653       Low
cufflinks 12.566        

0 Strain