Gene : Seita.7G258900 S. italica v2.2
Genomic Order:  2589 Name:  ? Seita.7G258900
Secondary Identifier:  ? PAC:32704910
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G258900 0.5kb upstream 0.5kb upstream 2085 true scaffold_7: 31288875-31290959 Setaria italica
Seita.7G258900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 31290460-31290959 Setaria italica
Seita.7G258900 0.5kb downstream 0.5kb downstream 2085 true scaffold_7: 31288375-31290459 Setaria italica
Seita.7G258900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 31288375-31288874 Setaria italica
Seita.7G258900 1.0kb upstream 1.0kb upstream 2585 true scaffold_7: 31288875-31291459 Setaria italica
Seita.7G258900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 31290460-31291459 Setaria italica
Seita.7G258900 1.0kb downstream 1.0kb downstream 2585 true scaffold_7: 31287875-31290459 Setaria italica
Seita.7G258900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 31287875-31288874 Setaria italica
Seita.7G258900 2.0kb upstream 2.0kb upstream 3585 true scaffold_7: 31288875-31292459 Setaria italica
Seita.7G258900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 31290460-31292459 Setaria italica
Seita.7G258900 2.0kb downstream 2.0kb downstream 3585 true scaffold_7: 31286875-31290459 Setaria italica
Seita.7G258900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 31286875-31288874 Setaria italica
Seita.7G258900 5.0kb upstream 5.0kb upstream 6585 true scaffold_7: 31288875-31295459 Setaria italica
Seita.7G258900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 31290460-31295459 Setaria italica
Seita.7G258900 5.0kb downstream 5.0kb downstream 6585 true scaffold_7: 31283875-31290459 Setaria italica
Seita.7G258900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 31283875-31288874 Setaria italica
Seita.7G258900 10.0kb upstream 10.0kb upstream 11585 true scaffold_7: 31288875-31300459 Setaria italica
Seita.7G258900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 31290460-31300459 Setaria italica
Seita.7G258900 10.0kb downstream 10.0kb downstream 11585 true scaffold_7: 31278875-31290459 Setaria italica
Seita.7G258900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 31278875-31288874 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996120 5273 Angiosperm View MSA
122192305 5267 Panicoideae View MSA
124590693 5269 Grass View MSA
121266291 5274 Embryophyte View MSA
123304634 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.078     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.102     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain