Gene : Seita.7G206300 S. italica v2.2
Defline:  (1 of 1) PTHR10795:SF322 - SUBTILISIN SERINE PROTEASE-RELATED Genomic Order:  2063
Name:  ? Seita.7G206300 Secondary Identifier:  ? PAC:32702917
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G206300 0.5kb upstream 0.5kb upstream 3782 true scaffold_7: 27798252-27802033 Setaria italica
Seita.7G206300 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 27801534-27802033 Setaria italica
Seita.7G206300 0.5kb downstream 0.5kb downstream 3782 true scaffold_7: 27797752-27801533 Setaria italica
Seita.7G206300 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 27797752-27798251 Setaria italica
Seita.7G206300 1.0kb upstream 1.0kb upstream 4282 true scaffold_7: 27798252-27802533 Setaria italica
Seita.7G206300 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 27801534-27802533 Setaria italica
Seita.7G206300 1.0kb downstream 1.0kb downstream 4282 true scaffold_7: 27797252-27801533 Setaria italica
Seita.7G206300 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 27797252-27798251 Setaria italica
Seita.7G206300 2.0kb upstream 2.0kb upstream 5282 true scaffold_7: 27798252-27803533 Setaria italica
Seita.7G206300 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 27801534-27803533 Setaria italica
Seita.7G206300 2.0kb downstream 2.0kb downstream 5282 true scaffold_7: 27796252-27801533 Setaria italica
Seita.7G206300 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 27796252-27798251 Setaria italica
Seita.7G206300 5.0kb upstream 5.0kb upstream 8282 true scaffold_7: 27798252-27806533 Setaria italica
Seita.7G206300 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 27801534-27806533 Setaria italica
Seita.7G206300 5.0kb downstream 5.0kb downstream 8282 true scaffold_7: 27793252-27801533 Setaria italica
Seita.7G206300 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 27793252-27798251 Setaria italica
Seita.7G206300 10.0kb upstream 10.0kb upstream 13282 true scaffold_7: 27798252-27811533 Setaria italica
Seita.7G206300 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 27801534-27811533 Setaria italica
Seita.7G206300 10.0kb downstream 10.0kb downstream 13282 true scaffold_7: 27788252-27801533 Setaria italica
Seita.7G206300 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 27788252-27798251 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041372 5273 Angiosperm View MSA
122197237 5267 Panicoideae View MSA
124578152 5269 Grass View MSA
121349729 5274 Embryophyte View MSA
123428602 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.388     High  
cufflinks 54.616     High High
cufflinks 0.521        
cufflinks 0.229       Low
cufflinks 0.43        
cufflinks 58.188     High High
cufflinks 14.582     High  
cufflinks 15.504     High  
cufflinks 13.058     High  
cufflinks 20.422     High High
cufflinks 21.166     High High
cufflinks 0.287       Low
cufflinks 0.132     Low Low
cufflinks 0.73        
cufflinks 0.675        
cufflinks 5.715        
cufflinks 0.5        
cufflinks 1.893        
cufflinks 0.456        
cufflinks 0.531        

0 Strain