Gene : Seita.7G208000 S. italica v2.2
Defline:  (1 of 98) 3.1.1.3 - Triacylglycerol lipase / Triglyceride lipase Genomic Order:  2080
Name:  ? Seita.7G208000 Secondary Identifier:  ? PAC:32704190
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica LIPAS-PWY Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G208000 0.5kb upstream 0.5kb upstream 2339 true scaffold_7: 27932462-27934800 Setaria italica
Seita.7G208000 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 27932462-27932961 Setaria italica
Seita.7G208000 0.5kb downstream 0.5kb downstream 2339 true scaffold_7: 27932962-27935300 Setaria italica
Seita.7G208000 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 27934801-27935300 Setaria italica
Seita.7G208000 1.0kb upstream 1.0kb upstream 2839 true scaffold_7: 27931962-27934800 Setaria italica
Seita.7G208000 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 27931962-27932961 Setaria italica
Seita.7G208000 1.0kb downstream 1.0kb downstream 2839 true scaffold_7: 27932962-27935800 Setaria italica
Seita.7G208000 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 27934801-27935800 Setaria italica
Seita.7G208000 2.0kb upstream 2.0kb upstream 3839 true scaffold_7: 27930962-27934800 Setaria italica
Seita.7G208000 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 27930962-27932961 Setaria italica
Seita.7G208000 2.0kb downstream 2.0kb downstream 3839 true scaffold_7: 27932962-27936800 Setaria italica
Seita.7G208000 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 27934801-27936800 Setaria italica
Seita.7G208000 5.0kb upstream 5.0kb upstream 6839 true scaffold_7: 27927962-27934800 Setaria italica
Seita.7G208000 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 27927962-27932961 Setaria italica
Seita.7G208000 5.0kb downstream 5.0kb downstream 6839 true scaffold_7: 27932962-27939800 Setaria italica
Seita.7G208000 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 27934801-27939800 Setaria italica
Seita.7G208000 10.0kb upstream 10.0kb upstream 11839 true scaffold_7: 27922962-27934800 Setaria italica
Seita.7G208000 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 27922962-27932961 Setaria italica
Seita.7G208000 10.0kb downstream 10.0kb downstream 11839 true scaffold_7: 27932962-27944800 Setaria italica
Seita.7G208000 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 27934801-27944800 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185540 5267 Panicoideae View MSA
124588807 5269 Grass View MSA
122046868 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low  
cufflinks 3.581       High
cufflinks 0.01     Low  
cufflinks 0.015     Low  
cufflinks 0.03     Low  
cufflinks 2.787       High
cufflinks 0.013     Low  
cufflinks 0.02     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.026     Low  
cufflinks 0.147     Low  
cufflinks 0.033     Low  
cufflinks 0.078     Low  
cufflinks 0.021     Low  
cufflinks 0.049     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  

0 Strain