Gene : Seita.7G304800 S. italica v2.2
Defline:  (1 of 42) PF04525 - LURP-one-related (LOR) Genomic Order:  3048
Name:  ? Seita.7G304800 Secondary Identifier:  ? PAC:32701921
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G304800 0.5kb upstream 0.5kb upstream 2513 true scaffold_7: 34315355-34317867 Setaria italica
Seita.7G304800 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 34317368-34317867 Setaria italica
Seita.7G304800 0.5kb downstream 0.5kb downstream 2513 true scaffold_7: 34314855-34317367 Setaria italica
Seita.7G304800 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 34314855-34315354 Setaria italica
Seita.7G304800 1.0kb upstream 1.0kb upstream 3013 true scaffold_7: 34315355-34318367 Setaria italica
Seita.7G304800 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 34317368-34318367 Setaria italica
Seita.7G304800 1.0kb downstream 1.0kb downstream 3013 true scaffold_7: 34314355-34317367 Setaria italica
Seita.7G304800 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 34314355-34315354 Setaria italica
Seita.7G304800 2.0kb upstream 2.0kb upstream 4013 true scaffold_7: 34315355-34319367 Setaria italica
Seita.7G304800 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 34317368-34319367 Setaria italica
Seita.7G304800 2.0kb downstream 2.0kb downstream 4013 true scaffold_7: 34313355-34317367 Setaria italica
Seita.7G304800 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 34313355-34315354 Setaria italica
Seita.7G304800 5.0kb upstream 5.0kb upstream 7013 true scaffold_7: 34315355-34322367 Setaria italica
Seita.7G304800 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 34317368-34322367 Setaria italica
Seita.7G304800 5.0kb downstream 5.0kb downstream 7013 true scaffold_7: 34310355-34317367 Setaria italica
Seita.7G304800 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 34310355-34315354 Setaria italica
Seita.7G304800 10.0kb upstream 10.0kb upstream 12013 true scaffold_7: 34315355-34327367 Setaria italica
Seita.7G304800 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 34317368-34327367 Setaria italica
Seita.7G304800 10.0kb downstream 10.0kb downstream 12013 true scaffold_7: 34305355-34317367 Setaria italica
Seita.7G304800 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 34305355-34315354 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194387 5267 Panicoideae View MSA
124581066 5269 Grass View MSA
122048664 5273 Angiosperm View MSA
121311063 5274 Embryophyte View MSA
123348415 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.032     Low  
cufflinks 0.391        
cufflinks 0.706       High
cufflinks 0.715       High
cufflinks 0.342        
cufflinks 0.344        
cufflinks 0.527        
cufflinks 0.281        
cufflinks 0.096     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.807       High
cufflinks 0.008     Low Low
cufflinks 0.296        
cufflinks 0.063     Low  
cufflinks 0.066     Low  
cufflinks 0.603        
cufflinks 0.017     Low Low

0 Strain