Gene : Seita.7G310100 S. italica v2.2
Defline:  (1 of 6) PTHR31776:SF0 - ALPHA-L-ARABINOFURANOSIDASE 1-RELATED Genomic Order:  3101
Name:  ? Seita.7G310100 Secondary Identifier:  ? PAC:32703608
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G310100 0.5kb upstream 0.5kb upstream 7227 true scaffold_7: 34639280-34646506 Setaria italica
Seita.7G310100 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 34639280-34639779 Setaria italica
Seita.7G310100 0.5kb downstream 0.5kb downstream 7227 true scaffold_7: 34639780-34647006 Setaria italica
Seita.7G310100 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 34646507-34647006 Setaria italica
Seita.7G310100 1.0kb upstream 1.0kb upstream 7727 true scaffold_7: 34638780-34646506 Setaria italica
Seita.7G310100 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 34638780-34639779 Setaria italica
Seita.7G310100 1.0kb downstream 1.0kb downstream 7727 true scaffold_7: 34639780-34647506 Setaria italica
Seita.7G310100 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 34646507-34647506 Setaria italica
Seita.7G310100 2.0kb upstream 2.0kb upstream 8727 true scaffold_7: 34637780-34646506 Setaria italica
Seita.7G310100 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 34637780-34639779 Setaria italica
Seita.7G310100 2.0kb downstream 2.0kb downstream 8727 true scaffold_7: 34639780-34648506 Setaria italica
Seita.7G310100 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 34646507-34648506 Setaria italica
Seita.7G310100 5.0kb upstream 5.0kb upstream 11727 true scaffold_7: 34634780-34646506 Setaria italica
Seita.7G310100 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 34634780-34639779 Setaria italica
Seita.7G310100 5.0kb downstream 5.0kb downstream 11727 true scaffold_7: 34639780-34651506 Setaria italica
Seita.7G310100 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 34646507-34651506 Setaria italica
Seita.7G310100 10.0kb upstream 10.0kb upstream 16727 true scaffold_7: 34629780-34646506 Setaria italica
Seita.7G310100 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 34629780-34639779 Setaria italica
Seita.7G310100 10.0kb downstream 10.0kb downstream 16727 true scaffold_7: 34639780-34656506 Setaria italica
Seita.7G310100 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 34646507-34656506 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192842 5267 Panicoideae View MSA
124578027 5269 Grass View MSA
122044822 5273 Angiosperm View MSA
121344375 5274 Embryophyte View MSA
123428022 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.921     High High
cufflinks 20.461     High  
cufflinks 14.399     High  
cufflinks 11.047     High Low
cufflinks 9.997       Low
cufflinks 21.863     High  
cufflinks 25.837     High  
cufflinks 11.505       Low
cufflinks 22.451     High  
cufflinks 34.502     High  
cufflinks 88.395     High High
cufflinks 18.306     High  
cufflinks 33.962     High  
cufflinks 9.353       Low
cufflinks 35.422     High  
cufflinks 26.105     High  
cufflinks 17.744     High  
cufflinks 23.483     High  
cufflinks 10.291       Low
cufflinks 19.625     High  

0 Strain