Gene : Seita.7G323100 S. italica v2.2
Defline:  (1 of 2) PTHR11772:SF18 - ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS Genomic Order:  3231
Name:  ? Seita.7G323100 Secondary Identifier:  ? PAC:32702257
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G323100 0.5kb upstream 0.5kb upstream 4848 true scaffold_7: 35323377-35328224 Setaria italica
Seita.7G323100 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 35323377-35323876 Setaria italica
Seita.7G323100 0.5kb downstream 0.5kb downstream 4848 true scaffold_7: 35323877-35328724 Setaria italica
Seita.7G323100 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 35328225-35328724 Setaria italica
Seita.7G323100 1.0kb upstream 1.0kb upstream 5348 true scaffold_7: 35322877-35328224 Setaria italica
Seita.7G323100 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 35322877-35323876 Setaria italica
Seita.7G323100 1.0kb downstream 1.0kb downstream 5348 true scaffold_7: 35323877-35329224 Setaria italica
Seita.7G323100 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 35328225-35329224 Setaria italica
Seita.7G323100 2.0kb upstream 2.0kb upstream 6348 true scaffold_7: 35321877-35328224 Setaria italica
Seita.7G323100 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 35321877-35323876 Setaria italica
Seita.7G323100 2.0kb downstream 2.0kb downstream 6348 true scaffold_7: 35323877-35330224 Setaria italica
Seita.7G323100 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 35328225-35330224 Setaria italica
Seita.7G323100 5.0kb upstream 5.0kb upstream 9348 true scaffold_7: 35318877-35328224 Setaria italica
Seita.7G323100 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 35318877-35323876 Setaria italica
Seita.7G323100 5.0kb downstream 5.0kb downstream 9348 true scaffold_7: 35323877-35333224 Setaria italica
Seita.7G323100 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 35328225-35333224 Setaria italica
Seita.7G323100 10.0kb upstream 10.0kb upstream 14348 true scaffold_7: 35313877-35328224 Setaria italica
Seita.7G323100 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 35313877-35323876 Setaria italica
Seita.7G323100 10.0kb downstream 10.0kb downstream 14348 true scaffold_7: 35323877-35338224 Setaria italica
Seita.7G323100 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 35328225-35338224 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192196 5267 Panicoideae View MSA
124580846 5269 Grass View MSA
122049991 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.905     High  
cufflinks 45.444     High  
cufflinks 13.262     High  
cufflinks 5.98       Low
cufflinks 4.488       Low
cufflinks 50.198     High High
cufflinks 23.293     High  
cufflinks 24.555     High  
cufflinks 15.333     High  
cufflinks 59.666     High High
cufflinks 50.867     High High
cufflinks 18.621     High  
cufflinks 25.695     High  
cufflinks 34.466     High  
cufflinks 39.534     High  
cufflinks 18.127     High  
cufflinks 20.879     High  
cufflinks 6.526       Low
cufflinks 51.54     High High
cufflinks 14.153        

0 Strain