Gene : Seita.7G279600 S. italica v2.2
Defline:  (1 of 1) PTHR12801:SF51 - PROTEIN Y56A3A.33 Genomic Order:  2796
Name:  ? Seita.7G279600 Secondary Identifier:  ? PAC:32703453
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G279600 0.5kb upstream 0.5kb upstream 8897 true scaffold_7: 32807202-32816098 Setaria italica
Seita.7G279600 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 32815599-32816098 Setaria italica
Seita.7G279600 0.5kb downstream 0.5kb downstream 8897 true scaffold_7: 32806702-32815598 Setaria italica
Seita.7G279600 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 32806702-32807201 Setaria italica
Seita.7G279600 1.0kb upstream 1.0kb upstream 9397 true scaffold_7: 32807202-32816598 Setaria italica
Seita.7G279600 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 32815599-32816598 Setaria italica
Seita.7G279600 1.0kb downstream 1.0kb downstream 9397 true scaffold_7: 32806202-32815598 Setaria italica
Seita.7G279600 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 32806202-32807201 Setaria italica
Seita.7G279600 2.0kb upstream 2.0kb upstream 10397 true scaffold_7: 32807202-32817598 Setaria italica
Seita.7G279600 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 32815599-32817598 Setaria italica
Seita.7G279600 2.0kb downstream 2.0kb downstream 10397 true scaffold_7: 32805202-32815598 Setaria italica
Seita.7G279600 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 32805202-32807201 Setaria italica
Seita.7G279600 5.0kb upstream 5.0kb upstream 13397 true scaffold_7: 32807202-32820598 Setaria italica
Seita.7G279600 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 32815599-32820598 Setaria italica
Seita.7G279600 5.0kb downstream 5.0kb downstream 13397 true scaffold_7: 32802202-32815598 Setaria italica
Seita.7G279600 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 32802202-32807201 Setaria italica
Seita.7G279600 10.0kb upstream 10.0kb upstream 18397 true scaffold_7: 32807202-32825598 Setaria italica
Seita.7G279600 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 32815599-32825598 Setaria italica
Seita.7G279600 10.0kb downstream 10.0kb downstream 18397 true scaffold_7: 32797202-32815598 Setaria italica
Seita.7G279600 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 32797202-32807201 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183708 5267 Panicoideae View MSA
124577817 5269 Grass View MSA
122044600 5273 Angiosperm View MSA
121347070 5274 Embryophyte View MSA
123425683 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.802        
cufflinks 0.925        
cufflinks 1.019       High
cufflinks 0.714        
cufflinks 0.593       Low
cufflinks 0.934        
cufflinks 0.777        
cufflinks 0.933        
cufflinks 0.76        
cufflinks 0.467       Low
cufflinks 0.676        
cufflinks 0.813        
cufflinks 0.563       Low
cufflinks 0.688        
cufflinks 0.697        
cufflinks 1.216       High
cufflinks 0.726        
cufflinks 1.193       High
cufflinks 0.61        
cufflinks 0.725        

0 Strain