Gene : Seita.7G283500 S. italica v2.2
Defline:  (1 of 1) PTHR11566:SF78 - DYNAMIN-LIKE PROTEIN ARC5 Genomic Order:  2835
Name:  ? Seita.7G283500 Secondary Identifier:  ? PAC:32703843
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G283500 0.5kb upstream 0.5kb upstream 8751 true scaffold_7: 33036252-33045002 Setaria italica
Seita.7G283500 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 33036252-33036751 Setaria italica
Seita.7G283500 0.5kb downstream 0.5kb downstream 8751 true scaffold_7: 33036752-33045502 Setaria italica
Seita.7G283500 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 33045003-33045502 Setaria italica
Seita.7G283500 1.0kb upstream 1.0kb upstream 9251 true scaffold_7: 33035752-33045002 Setaria italica
Seita.7G283500 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 33035752-33036751 Setaria italica
Seita.7G283500 1.0kb downstream 1.0kb downstream 9251 true scaffold_7: 33036752-33046002 Setaria italica
Seita.7G283500 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 33045003-33046002 Setaria italica
Seita.7G283500 2.0kb upstream 2.0kb upstream 10251 true scaffold_7: 33034752-33045002 Setaria italica
Seita.7G283500 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 33034752-33036751 Setaria italica
Seita.7G283500 2.0kb downstream 2.0kb downstream 10251 true scaffold_7: 33036752-33047002 Setaria italica
Seita.7G283500 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 33045003-33047002 Setaria italica
Seita.7G283500 5.0kb upstream 5.0kb upstream 13251 true scaffold_7: 33031752-33045002 Setaria italica
Seita.7G283500 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 33031752-33036751 Setaria italica
Seita.7G283500 5.0kb downstream 5.0kb downstream 13251 true scaffold_7: 33036752-33050002 Setaria italica
Seita.7G283500 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 33045003-33050002 Setaria italica
Seita.7G283500 10.0kb upstream 10.0kb upstream 18251 true scaffold_7: 33026752-33045002 Setaria italica
Seita.7G283500 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 33026752-33036751 Setaria italica
Seita.7G283500 10.0kb downstream 10.0kb downstream 18251 true scaffold_7: 33036752-33055002 Setaria italica
Seita.7G283500 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 33045003-33055002 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176178 5267 Panicoideae View MSA
124580323 5269 Grass View MSA
122044682 5273 Angiosperm View MSA
121351086 5274 Embryophyte View MSA
123424369 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.135       High
cufflinks 8.013        
cufflinks 4.441        
cufflinks 3.686        
cufflinks 5.254        
cufflinks 9.279       High
cufflinks 9.526       High
cufflinks 5.898        
cufflinks 9.093       High
cufflinks 4.887        
cufflinks 7.039        
cufflinks 1.484       Low
cufflinks 2.606        
cufflinks 2.575        
cufflinks 1.509       Low
cufflinks 8.412        
cufflinks 2.149       Low
cufflinks 6.717        
cufflinks 1.627       Low
cufflinks 1.872       Low

0 Strain