Gene : Seita.8G060500 S. italica v2.2
Defline:  (1 of 1) PTHR23315:SF135 - ARMADILLO/BETA-CATENIN-LIKE REPEAT AND C2 CALCIUM/LIPID-BINDING DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  605
Name:  ? Seita.8G060500 Secondary Identifier:  ? PAC:32715772
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G060500 0.5kb upstream 0.5kb upstream 10801 true scaffold_8: 5625616-5636416 Setaria italica
Seita.8G060500 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5625616-5626115 Setaria italica
Seita.8G060500 0.5kb downstream 0.5kb downstream 10801 true scaffold_8: 5626116-5636916 Setaria italica
Seita.8G060500 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5636417-5636916 Setaria italica
Seita.8G060500 1.0kb upstream 1.0kb upstream 11301 true scaffold_8: 5625116-5636416 Setaria italica
Seita.8G060500 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5625116-5626115 Setaria italica
Seita.8G060500 1.0kb downstream 1.0kb downstream 11301 true scaffold_8: 5626116-5637416 Setaria italica
Seita.8G060500 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5636417-5637416 Setaria italica
Seita.8G060500 2.0kb upstream 2.0kb upstream 12301 true scaffold_8: 5624116-5636416 Setaria italica
Seita.8G060500 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5624116-5626115 Setaria italica
Seita.8G060500 2.0kb downstream 2.0kb downstream 12301 true scaffold_8: 5626116-5638416 Setaria italica
Seita.8G060500 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5636417-5638416 Setaria italica
Seita.8G060500 5.0kb upstream 5.0kb upstream 15301 true scaffold_8: 5621116-5636416 Setaria italica
Seita.8G060500 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5621116-5626115 Setaria italica
Seita.8G060500 5.0kb downstream 5.0kb downstream 15301 true scaffold_8: 5626116-5641416 Setaria italica
Seita.8G060500 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5636417-5641416 Setaria italica
Seita.8G060500 10.0kb upstream 10.0kb upstream 20301 true scaffold_8: 5616116-5636416 Setaria italica
Seita.8G060500 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5616116-5626115 Setaria italica
Seita.8G060500 10.0kb downstream 10.0kb downstream 20301 true scaffold_8: 5626116-5646416 Setaria italica
Seita.8G060500 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5636417-5646416 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048106 5273 Angiosperm View MSA
122187452 5267 Panicoideae View MSA
124583203 5269 Grass View MSA
121347002 5274 Embryophyte View MSA
123380478 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.955       High
cufflinks 5.897       High
cufflinks 1.148        
cufflinks 0.645       Low
cufflinks 1.091        
cufflinks 5.016       High
cufflinks 4.016       High
cufflinks 1.585        
cufflinks 2.609        
cufflinks 1.748        
cufflinks 4.093       High
cufflinks 0.991        
cufflinks 1.996        
cufflinks 1.765        
cufflinks 3.151        
cufflinks 1.95        
cufflinks 1.072        
cufflinks 0.893       Low
cufflinks 0.811       Low
cufflinks 1.857        

0 Strain