Gene : Seita.8G082600 S. italica v2.2
Defline:  (1 of 63) PF00892 - EamA-like transporter family (EamA) Genomic Order:  826
Name:  ? Seita.8G082600 Secondary Identifier:  ? PAC:32716582
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G082600 0.5kb upstream 0.5kb upstream 6419 true scaffold_8: 9220293-9226711 Setaria italica
Seita.8G082600 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9226212-9226711 Setaria italica
Seita.8G082600 0.5kb downstream 0.5kb downstream 6419 true scaffold_8: 9219793-9226211 Setaria italica
Seita.8G082600 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9219793-9220292 Setaria italica
Seita.8G082600 1.0kb upstream 1.0kb upstream 6919 true scaffold_8: 9220293-9227211 Setaria italica
Seita.8G082600 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9226212-9227211 Setaria italica
Seita.8G082600 1.0kb downstream 1.0kb downstream 6919 true scaffold_8: 9219293-9226211 Setaria italica
Seita.8G082600 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9219293-9220292 Setaria italica
Seita.8G082600 2.0kb upstream 2.0kb upstream 7919 true scaffold_8: 9220293-9228211 Setaria italica
Seita.8G082600 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9226212-9228211 Setaria italica
Seita.8G082600 2.0kb downstream 2.0kb downstream 7919 true scaffold_8: 9218293-9226211 Setaria italica
Seita.8G082600 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9218293-9220292 Setaria italica
Seita.8G082600 5.0kb upstream 5.0kb upstream 10919 true scaffold_8: 9220293-9231211 Setaria italica
Seita.8G082600 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9226212-9231211 Setaria italica
Seita.8G082600 5.0kb downstream 5.0kb downstream 10919 true scaffold_8: 9215293-9226211 Setaria italica
Seita.8G082600 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9215293-9220292 Setaria italica
Seita.8G082600 10.0kb upstream 10.0kb upstream 15919 true scaffold_8: 9220293-9236211 Setaria italica
Seita.8G082600 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9226212-9236211 Setaria italica
Seita.8G082600 10.0kb downstream 10.0kb downstream 15919 true scaffold_8: 9210293-9226211 Setaria italica
Seita.8G082600 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9210293-9220292 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026670 5273 Angiosperm View MSA
122177451 5267 Panicoideae View MSA
124575805 5269 Grass View MSA
121296466 5274 Embryophyte View MSA
123334621 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.032     Low  
cufflinks 0.079     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.01     Low  
cufflinks 0.088     Low High
cufflinks 0.061     Low  
cufflinks 0.053     Low  
cufflinks 0.067     Low High
cufflinks 0.006     Low  
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain