Gene : Seita.8G002000 S. italica v2.2
Defline:  (1 of 2) PTHR24089:SF300 - MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN C Genomic Order:  20
Name:  ? Seita.8G002000 Secondary Identifier:  ? PAC:32716063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G002000 0.5kb upstream 0.5kb upstream 5332 true scaffold_8: 133910-139241 Setaria italica
Seita.8G002000 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 138742-139241 Setaria italica
Seita.8G002000 0.5kb downstream 0.5kb downstream 5332 true scaffold_8: 133410-138741 Setaria italica
Seita.8G002000 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 133410-133909 Setaria italica
Seita.8G002000 1.0kb upstream 1.0kb upstream 5832 true scaffold_8: 133910-139741 Setaria italica
Seita.8G002000 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 138742-139741 Setaria italica
Seita.8G002000 1.0kb downstream 1.0kb downstream 5832 true scaffold_8: 132910-138741 Setaria italica
Seita.8G002000 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 132910-133909 Setaria italica
Seita.8G002000 2.0kb upstream 2.0kb upstream 6832 true scaffold_8: 133910-140741 Setaria italica
Seita.8G002000 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 138742-140741 Setaria italica
Seita.8G002000 2.0kb downstream 2.0kb downstream 6832 true scaffold_8: 131910-138741 Setaria italica
Seita.8G002000 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 131910-133909 Setaria italica
Seita.8G002000 5.0kb upstream 5.0kb upstream 9832 true scaffold_8: 133910-143741 Setaria italica
Seita.8G002000 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 138742-143741 Setaria italica
Seita.8G002000 5.0kb downstream 5.0kb downstream 9832 true scaffold_8: 128910-138741 Setaria italica
Seita.8G002000 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 128910-133909 Setaria italica
Seita.8G002000 10.0kb upstream 10.0kb upstream 14832 true scaffold_8: 133910-148741 Setaria italica
Seita.8G002000 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 138742-148741 Setaria italica
Seita.8G002000 10.0kb downstream 10.0kb downstream 14832 true scaffold_8: 123910-138741 Setaria italica
Seita.8G002000 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 123910-133909 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187338 5267 Panicoideae View MSA
124590518 5269 Grass View MSA
122046153 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121348054 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.129        
cufflinks 7.746        
cufflinks 37.32     High High
cufflinks 34.839     High High
cufflinks 27.415     High High
cufflinks 8.324        
cufflinks 15.687     High  
cufflinks 14.873     High  
cufflinks 14.959     High  
cufflinks 4.901       Low
cufflinks 8.346        
cufflinks 8.885        
cufflinks 11.386        
cufflinks 14.761     High  
cufflinks 4.899       Low
cufflinks 25.727     High High
cufflinks 6.5       Low
cufflinks 25.722     High High
cufflinks 31.35     High High
cufflinks 6.306       Low

0 Strain