Gene : Seita.8G005000 S. italica v2.2
Defline:  (1 of 5) 2.7.1.137 - Phosphatidylinositol 3-kinase / Type III phosphoinositide 3-kinase Genomic Order:  50
Name:  ? Seita.8G005000 Secondary Identifier:  ? PAC:32716612
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-6352 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G005000 0.5kb upstream 0.5kb upstream 2844 true scaffold_8: 299094-301937 Setaria italica
Seita.8G005000 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 299094-299593 Setaria italica
Seita.8G005000 0.5kb downstream 0.5kb downstream 2844 true scaffold_8: 299594-302437 Setaria italica
Seita.8G005000 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 301938-302437 Setaria italica
Seita.8G005000 1.0kb upstream 1.0kb upstream 3344 true scaffold_8: 298594-301937 Setaria italica
Seita.8G005000 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 298594-299593 Setaria italica
Seita.8G005000 1.0kb downstream 1.0kb downstream 3344 true scaffold_8: 299594-302937 Setaria italica
Seita.8G005000 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 301938-302937 Setaria italica
Seita.8G005000 2.0kb upstream 2.0kb upstream 4344 true scaffold_8: 297594-301937 Setaria italica
Seita.8G005000 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 297594-299593 Setaria italica
Seita.8G005000 2.0kb downstream 2.0kb downstream 4344 true scaffold_8: 299594-303937 Setaria italica
Seita.8G005000 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 301938-303937 Setaria italica
Seita.8G005000 5.0kb upstream 5.0kb upstream 7344 true scaffold_8: 294594-301937 Setaria italica
Seita.8G005000 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 294594-299593 Setaria italica
Seita.8G005000 5.0kb downstream 5.0kb downstream 7344 true scaffold_8: 299594-306937 Setaria italica
Seita.8G005000 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 301938-306937 Setaria italica
Seita.8G005000 10.0kb upstream 10.0kb upstream 12344 true scaffold_8: 289594-301937 Setaria italica
Seita.8G005000 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 289594-299593 Setaria italica
Seita.8G005000 10.0kb downstream 10.0kb downstream 12344 true scaffold_8: 299594-311937 Setaria italica
Seita.8G005000 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 301938-311937 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122118383 5267 Panicoideae View MSA
124585937 5269 Grass View MSA
122042854 5273 Angiosperm View MSA
121346358 5274 Embryophyte View MSA
123428663 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.013        
cufflinks 6.453        
cufflinks 3.11        
cufflinks 3.136        
cufflinks 2.465       Low
cufflinks 6.751        
cufflinks 3.946        
cufflinks 4.373        
cufflinks 2.066       Low
cufflinks 4.673        
cufflinks 3.914        
cufflinks 7.833       High
cufflinks 6.342        
cufflinks 3.317        
cufflinks 8.294       High
cufflinks 4.081        
cufflinks 8.506       High
cufflinks 3.351        
cufflinks 3.926        
cufflinks 7.72       High

0 Strain