Gene : Seita.8G009500 S. italica v2.2
Genomic Order:  95 Name:  ? Seita.8G009500
Secondary Identifier:  ? PAC:32716965
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G009500 0.5kb upstream 0.5kb upstream 2316 true scaffold_8: 576386-578701 Setaria italica
Seita.8G009500 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 576386-576885 Setaria italica
Seita.8G009500 0.5kb downstream 0.5kb downstream 2316 true scaffold_8: 576886-579201 Setaria italica
Seita.8G009500 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 578702-579201 Setaria italica
Seita.8G009500 1.0kb upstream 1.0kb upstream 2816 true scaffold_8: 575886-578701 Setaria italica
Seita.8G009500 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 575886-576885 Setaria italica
Seita.8G009500 1.0kb downstream 1.0kb downstream 2816 true scaffold_8: 576886-579701 Setaria italica
Seita.8G009500 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 578702-579701 Setaria italica
Seita.8G009500 2.0kb upstream 2.0kb upstream 3816 true scaffold_8: 574886-578701 Setaria italica
Seita.8G009500 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 574886-576885 Setaria italica
Seita.8G009500 2.0kb downstream 2.0kb downstream 3816 true scaffold_8: 576886-580701 Setaria italica
Seita.8G009500 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 578702-580701 Setaria italica
Seita.8G009500 5.0kb upstream 5.0kb upstream 6816 true scaffold_8: 571886-578701 Setaria italica
Seita.8G009500 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 571886-576885 Setaria italica
Seita.8G009500 5.0kb downstream 5.0kb downstream 6816 true scaffold_8: 576886-583701 Setaria italica
Seita.8G009500 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 578702-583701 Setaria italica
Seita.8G009500 10.0kb upstream 10.0kb upstream 11816 true scaffold_8: 566886-578701 Setaria italica
Seita.8G009500 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 566886-576885 Setaria italica
Seita.8G009500 10.0kb downstream 10.0kb downstream 11816 true scaffold_8: 576886-588701 Setaria italica
Seita.8G009500 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 578702-588701 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192751 5267 Panicoideae View MSA
124573113 5269 Grass View MSA
122048705 5273 Angiosperm View MSA
121347737 5274 Embryophyte View MSA
123380610 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.484       High
cufflinks 0.653        
cufflinks 0.269        
cufflinks 0.181       Low
cufflinks 0.146       Low
cufflinks 0.517        
cufflinks 0.227        
cufflinks 0.249        
cufflinks 0.158       Low
cufflinks 4.358       High
cufflinks 1.48       High
cufflinks 0.353        
cufflinks 1.672       High
cufflinks 0.38        
cufflinks 0.587        
cufflinks 0.722        
cufflinks 0.415        
cufflinks 1.154        
cufflinks 0.356        
cufflinks 0.264        

0 Strain