Gene : Seita.8G017100 S. italica v2.2
Defline:  (1 of 8) PF11204 - Protein of unknown function (DUF2985) (DUF2985) Genomic Order:  171
Name:  ? Seita.8G017100 Secondary Identifier:  ? PAC:32714818
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G017100 0.5kb upstream 0.5kb upstream 2009 true scaffold_8: 979989-981997 Setaria italica
Seita.8G017100 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 979989-980488 Setaria italica
Seita.8G017100 0.5kb downstream 0.5kb downstream 2009 true scaffold_8: 980489-982497 Setaria italica
Seita.8G017100 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 981998-982497 Setaria italica
Seita.8G017100 1.0kb upstream 1.0kb upstream 2509 true scaffold_8: 979489-981997 Setaria italica
Seita.8G017100 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 979489-980488 Setaria italica
Seita.8G017100 1.0kb downstream 1.0kb downstream 2509 true scaffold_8: 980489-982997 Setaria italica
Seita.8G017100 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 981998-982997 Setaria italica
Seita.8G017100 2.0kb upstream 2.0kb upstream 3509 true scaffold_8: 978489-981997 Setaria italica
Seita.8G017100 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 978489-980488 Setaria italica
Seita.8G017100 2.0kb downstream 2.0kb downstream 3509 true scaffold_8: 980489-983997 Setaria italica
Seita.8G017100 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 981998-983997 Setaria italica
Seita.8G017100 5.0kb upstream 5.0kb upstream 6509 true scaffold_8: 975489-981997 Setaria italica
Seita.8G017100 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 975489-980488 Setaria italica
Seita.8G017100 5.0kb downstream 5.0kb downstream 6509 true scaffold_8: 980489-986997 Setaria italica
Seita.8G017100 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 981998-986997 Setaria italica
Seita.8G017100 10.0kb upstream 10.0kb upstream 11509 true scaffold_8: 970489-981997 Setaria italica
Seita.8G017100 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 970489-980488 Setaria italica
Seita.8G017100 10.0kb downstream 10.0kb downstream 11509 true scaffold_8: 980489-991997 Setaria italica
Seita.8G017100 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 981998-991997 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031424 5273 Angiosperm View MSA
122188200 5267 Panicoideae View MSA
124570137 5269 Grass View MSA
121300469 5274 Embryophyte View MSA
123338236 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.11        
cufflinks 0.05     Low  
cufflinks 0.024     Low  
cufflinks 0.011     Low Low
cufflinks 0.012     Low  
cufflinks 0.287       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.311     Low High
cufflinks 0.013     Low  
cufflinks 0.011     Low Low
cufflinks 0.045     Low  
cufflinks 0.485       High
cufflinks 0.023     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain