Gene : Seita.8G148300 S. italica v2.2
Defline:  (1 of 2) PTHR11746:SF89 - MAF-LIKE PROTEIN Genomic Order:  1483
Name:  ? Seita.8G148300 Secondary Identifier:  ? PAC:32717119
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G148300 0.5kb upstream 0.5kb upstream 4880 true scaffold_8: 28486746-28491625 Setaria italica
Seita.8G148300 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 28491126-28491625 Setaria italica
Seita.8G148300 0.5kb downstream 0.5kb downstream 4880 true scaffold_8: 28486246-28491125 Setaria italica
Seita.8G148300 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 28486246-28486745 Setaria italica
Seita.8G148300 1.0kb upstream 1.0kb upstream 5380 true scaffold_8: 28486746-28492125 Setaria italica
Seita.8G148300 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 28491126-28492125 Setaria italica
Seita.8G148300 1.0kb downstream 1.0kb downstream 5380 true scaffold_8: 28485746-28491125 Setaria italica
Seita.8G148300 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 28485746-28486745 Setaria italica
Seita.8G148300 2.0kb upstream 2.0kb upstream 6380 true scaffold_8: 28486746-28493125 Setaria italica
Seita.8G148300 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 28491126-28493125 Setaria italica
Seita.8G148300 2.0kb downstream 2.0kb downstream 6380 true scaffold_8: 28484746-28491125 Setaria italica
Seita.8G148300 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 28484746-28486745 Setaria italica
Seita.8G148300 5.0kb upstream 5.0kb upstream 9380 true scaffold_8: 28486746-28496125 Setaria italica
Seita.8G148300 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 28491126-28496125 Setaria italica
Seita.8G148300 5.0kb downstream 5.0kb downstream 9380 true scaffold_8: 28481746-28491125 Setaria italica
Seita.8G148300 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 28481746-28486745 Setaria italica
Seita.8G148300 10.0kb upstream 10.0kb upstream 14380 true scaffold_8: 28486746-28501125 Setaria italica
Seita.8G148300 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 28491126-28501125 Setaria italica
Seita.8G148300 10.0kb downstream 10.0kb downstream 14380 true scaffold_8: 28476746-28491125 Setaria italica
Seita.8G148300 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 28476746-28486745 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187804 5267 Panicoideae View MSA
124584749 5269 Grass View MSA
122045669 5273 Angiosperm View MSA
121347130 5274 Embryophyte View MSA
123427064 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.91        
cufflinks 3.015        
cufflinks 3.858        
cufflinks 4.114        
cufflinks 3.424        
cufflinks 2.958        
cufflinks 3.37        
cufflinks 6.598       High
cufflinks 4.585       High
cufflinks 2.527        
cufflinks 1.848       Low
cufflinks 2.258        
cufflinks 1.953       Low
cufflinks 4.539       High
cufflinks 2.082       Low
cufflinks 4.856       High
cufflinks 2.475        
cufflinks 3.612        
cufflinks 3.363        
cufflinks 2.263        

0 Strain