Gene : Seita.8G222300 S. italica v2.2
Defline:  (1 of 1) PTHR11878 - SODIUM/CALCIUM EXCHANGER Genomic Order:  2223
Name:  ? Seita.8G222300 Secondary Identifier:  ? PAC:32717449
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G222300 0.5kb upstream 0.5kb upstream 4690 true scaffold_8: 37529411-37534100 Setaria italica
Seita.8G222300 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 37533601-37534100 Setaria italica
Seita.8G222300 0.5kb downstream 0.5kb downstream 4690 true scaffold_8: 37528911-37533600 Setaria italica
Seita.8G222300 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 37528911-37529410 Setaria italica
Seita.8G222300 1.0kb upstream 1.0kb upstream 5190 true scaffold_8: 37529411-37534600 Setaria italica
Seita.8G222300 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 37533601-37534600 Setaria italica
Seita.8G222300 1.0kb downstream 1.0kb downstream 5190 true scaffold_8: 37528411-37533600 Setaria italica
Seita.8G222300 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 37528411-37529410 Setaria italica
Seita.8G222300 2.0kb upstream 2.0kb upstream 6190 true scaffold_8: 37529411-37535600 Setaria italica
Seita.8G222300 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 37533601-37535600 Setaria italica
Seita.8G222300 2.0kb downstream 2.0kb downstream 6190 true scaffold_8: 37527411-37533600 Setaria italica
Seita.8G222300 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 37527411-37529410 Setaria italica
Seita.8G222300 5.0kb upstream 5.0kb upstream 9190 true scaffold_8: 37529411-37538600 Setaria italica
Seita.8G222300 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 37533601-37538600 Setaria italica
Seita.8G222300 5.0kb downstream 5.0kb downstream 9190 true scaffold_8: 37524411-37533600 Setaria italica
Seita.8G222300 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 37524411-37529410 Setaria italica
Seita.8G222300 10.0kb upstream 10.0kb upstream 14190 true scaffold_8: 37529411-37543600 Setaria italica
Seita.8G222300 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 37533601-37543600 Setaria italica
Seita.8G222300 10.0kb downstream 10.0kb downstream 14190 true scaffold_8: 37519411-37533600 Setaria italica
Seita.8G222300 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 37519411-37529410 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026222 5273 Angiosperm View MSA
122183616 5267 Panicoideae View MSA
124589672 5269 Grass View MSA
121347754 5274 Embryophyte View MSA
123427764 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.471        
cufflinks 3.047       Low
cufflinks 21.345     High  
cufflinks 23.324     High  
cufflinks 14.931     High  
cufflinks 3.567        
cufflinks 29.607     High High
cufflinks 8.238        
cufflinks 13.64     High  
cufflinks 4.695        
cufflinks 10.186        
cufflinks 1.897       Low
cufflinks 7.271        
cufflinks 12.216        
cufflinks 3.105       Low
cufflinks 52.118     High High
cufflinks 2.789       Low
cufflinks 5.173        
cufflinks 51.147     High High
cufflinks 3.132       Low

0 Strain