Gene : Seita.9G054300 S. italica v2.2
Defline:  (1 of 123) PF07762 - Protein of unknown function (DUF1618) (DUF1618) Genomic Order:  543
Name:  ? Seita.9G054300 Secondary Identifier:  ? PAC:32687223
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G054300 0.5kb upstream 0.5kb upstream 1892 true scaffold_9: 3138736-3140627 Setaria italica
Seita.9G054300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3138736-3139235 Setaria italica
Seita.9G054300 0.5kb downstream 0.5kb downstream 1892 true scaffold_9: 3139236-3141127 Setaria italica
Seita.9G054300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3140628-3141127 Setaria italica
Seita.9G054300 1.0kb upstream 1.0kb upstream 2392 true scaffold_9: 3138236-3140627 Setaria italica
Seita.9G054300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3138236-3139235 Setaria italica
Seita.9G054300 1.0kb downstream 1.0kb downstream 2392 true scaffold_9: 3139236-3141627 Setaria italica
Seita.9G054300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3140628-3141627 Setaria italica
Seita.9G054300 2.0kb upstream 2.0kb upstream 3392 true scaffold_9: 3137236-3140627 Setaria italica
Seita.9G054300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3137236-3139235 Setaria italica
Seita.9G054300 2.0kb downstream 2.0kb downstream 3392 true scaffold_9: 3139236-3142627 Setaria italica
Seita.9G054300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3140628-3142627 Setaria italica
Seita.9G054300 5.0kb upstream 5.0kb upstream 6392 true scaffold_9: 3134236-3140627 Setaria italica
Seita.9G054300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3134236-3139235 Setaria italica
Seita.9G054300 5.0kb downstream 5.0kb downstream 6392 true scaffold_9: 3139236-3145627 Setaria italica
Seita.9G054300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3140628-3145627 Setaria italica
Seita.9G054300 10.0kb upstream 10.0kb upstream 11392 true scaffold_9: 3129236-3140627 Setaria italica
Seita.9G054300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3129236-3139235 Setaria italica
Seita.9G054300 10.0kb downstream 10.0kb downstream 11392 true scaffold_9: 3139236-3150627 Setaria italica
Seita.9G054300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3140628-3150627 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994770 5273 Angiosperm View MSA
122193733 5267 Panicoideae View MSA
124585583 5269 Grass View MSA
121264986 5274 Embryophyte View MSA
123303402 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain