Gene : Seita.9G064700 S. italica v2.2
Defline:  (1 of 1) PTHR10926:SF29 - ALA-INTERACTING SUBUNIT 2-RELATED Genomic Order:  647
Name:  ? Seita.9G064700 Secondary Identifier:  ? PAC:32693116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G064700 0.5kb upstream 0.5kb upstream 5034 true scaffold_9: 3755105-3760138 Setaria italica
Seita.9G064700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3759639-3760138 Setaria italica
Seita.9G064700 0.5kb downstream 0.5kb downstream 5034 true scaffold_9: 3754605-3759638 Setaria italica
Seita.9G064700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3754605-3755104 Setaria italica
Seita.9G064700 1.0kb upstream 1.0kb upstream 5534 true scaffold_9: 3755105-3760638 Setaria italica
Seita.9G064700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3759639-3760638 Setaria italica
Seita.9G064700 1.0kb downstream 1.0kb downstream 5534 true scaffold_9: 3754105-3759638 Setaria italica
Seita.9G064700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3754105-3755104 Setaria italica
Seita.9G064700 2.0kb upstream 2.0kb upstream 6534 true scaffold_9: 3755105-3761638 Setaria italica
Seita.9G064700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3759639-3761638 Setaria italica
Seita.9G064700 2.0kb downstream 2.0kb downstream 6534 true scaffold_9: 3753105-3759638 Setaria italica
Seita.9G064700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3753105-3755104 Setaria italica
Seita.9G064700 5.0kb upstream 5.0kb upstream 9534 true scaffold_9: 3755105-3764638 Setaria italica
Seita.9G064700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3759639-3764638 Setaria italica
Seita.9G064700 5.0kb downstream 5.0kb downstream 9534 true scaffold_9: 3750105-3759638 Setaria italica
Seita.9G064700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3750105-3755104 Setaria italica
Seita.9G064700 10.0kb upstream 10.0kb upstream 14534 true scaffold_9: 3755105-3769638 Setaria italica
Seita.9G064700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3759639-3769638 Setaria italica
Seita.9G064700 10.0kb downstream 10.0kb downstream 14534 true scaffold_9: 3745105-3759638 Setaria italica
Seita.9G064700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3745105-3755104 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187277 5267 Panicoideae View MSA
124576258 5269 Grass View MSA
122046235 5273 Angiosperm View MSA
121349346 5274 Embryophyte View MSA
123425782 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.166        
cufflinks 7.257        
cufflinks 6.855        
cufflinks 7.748        
cufflinks 6.487        
cufflinks 6.612        
cufflinks 4.101       Low
cufflinks 7.728        
cufflinks 5.737        
cufflinks 5.906        
cufflinks 5.494        
cufflinks 7.821        
cufflinks 8.748       High
cufflinks 4.888       Low
cufflinks 8.402       High
cufflinks 5.034       Low
cufflinks 9.012       High
cufflinks 4.857       Low
cufflinks 6.016        
cufflinks 8.375       High

0 Strain